1 #ifndef Alignment_CommonAlignmentAlgorithm_AlignableIORoot_h 2 #define Alignment_CommonAlignmentAlgorithm_AlignableIORoot_h 23 const char*
filename,
int iter,
bool validCheck,
int& ierr );
27 const char* filename,
int iter,
int& ierr);
31 int iter,
bool validCheck,
int& ierr);
35 const char* filename,
int iter,
bool validCheck,
int& ierr);
39 const char* filename,
int iter,
int& ierr);
43 const char* filename,
int iter,
bool validCheck,
int& ierr);
47 const char* filename,
int iter,
int& ierr);
51 const char* filename,
int iter,
bool validCheck,
int& ierr);
55 const char* filename,
int iter,
int& ierr);
59 const char* filename,
int iter,
bool validCheck,
int& ierr);
63 const char* filename,
int iter,
int& ierr);
AlignableShifts readAlignableRelativePositions(const align::Alignables &alivec, const char *filename, int iter, int &ierr)
read Alignable relative positions (shift,rotation)
void writeAlignableOriginalPositions(const align::Alignables &alivec, const char *filename, int iter, bool validCheck, int &ierr)
write Alignable original (before misalignment) absolute positions
std::map< std::pair< Alignable *, Alignable * >, AlgebraicMatrix > Correlations
AlignablePositions readAlignableOriginalPositions(const align::Alignables &alivec, const char *filename, int iter, int &ierr)
read Alignable original (before misalignment) absolute positions
std::vector< AlignableRelData > AlignableShifts
virtual ~AlignmentIORoot()=default
void writeCorrelations(const align::Correlations &cormap, const char *filename, int iter, bool validCheck, int &ierr)
write Correlations
AlignablePositions readAlignableAbsolutePositions(const align::Alignables &alivec, const char *filename, int iter, int &ierr)
read Alignable current absolute positions
align::Correlations readCorrelations(const align::Alignables &alivec, const char *filename, int iter, int &ierr)
read Correlations
void writeAlignableRelativePositions(const align::Alignables &alivec, const char *filename, int iter, bool validCheck, int &ierr)
write Alignable relative positions (shift,rotation)
void writeAlignmentParameters(const align::Alignables &alivec, const char *filename, int iter, bool validCheck, int &ierr)
write AlignmentParameters
std::vector< Alignable * > Alignables
std::vector< AlignmentParameters * > Parameters
std::vector< AlignableAbsData > AlignablePositions
void writeAlignableAbsolutePositions(const align::Alignables &alivec, const char *filename, int iter, bool validCheck, int &ierr)
write Alignable current absolute positions
align::Parameters readAlignmentParameters(const align::Alignables &alivec, const char *filename, int iter, int &ierr)
read AlignmentParameters
void writeOrigRigidBodyAlignmentParameters(const align::Alignables &alivec, const char *filename, int iter, bool validCheck, int &ierr)
write RigidBodyAlignmentParameters as applied on top of original positions