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cmsswPreprocessor.CmsswPreprocessor Class Reference

Public Member Functions

def __init__ (self, configFile, command="cmsRun", addOrigAsSecondary=True, prefetch=False, options={})
 
def endLoop (self, component)
 
def maybePrefetchFiles (self, component)
 
def prefetchOneXrootdFile (self, fname)
 
def run (self, component, wd, firstEvent, nEvents)
 

Public Attributes

 addOrigAsSecondary
 
 command
 
 configFile
 
 garbageFiles
 
 options
 
 prefetch
 

Detailed Description

Definition at line 10 of file cmsswPreprocessor.py.

Constructor & Destructor Documentation

def cmsswPreprocessor.CmsswPreprocessor.__init__ (   self,
  configFile,
  command = "cmsRun",
  addOrigAsSecondary = True,
  prefetch = False,
  options = {} 
)

Definition at line 11 of file cmsswPreprocessor.py.

11  def __init__(self,configFile,command="cmsRun", addOrigAsSecondary=True, prefetch=False, options={}) :
12  self.configFile=configFile
13  self.command=command
14  self.addOrigAsSecondary=addOrigAsSecondary
15  self.prefetch=prefetch
16  self.garbageFiles=[]
17  self.options=options
18 
def __init__(self, configFile, command="cmsRun", addOrigAsSecondary=True, prefetch=False, options={})

Member Function Documentation

def cmsswPreprocessor.CmsswPreprocessor.endLoop (   self,
  component 
)

Definition at line 45 of file cmsswPreprocessor.py.

45  def endLoop(self,component):
46  for fname in component._preprocessor_tempFiles:
47  print "Removing local cache file ",fname
48  os.remove(fname)
49  component._preprocessor_tempFiles = []
def cmsswPreprocessor.CmsswPreprocessor.maybePrefetchFiles (   self,
  component 
)

Definition at line 33 of file cmsswPreprocessor.py.

References cmsswPreprocessor.CmsswPreprocessor.prefetch, and cmsswPreprocessor.CmsswPreprocessor.prefetchOneXrootdFile().

Referenced by cmsswPreprocessor.CmsswPreprocessor.run().

33  def maybePrefetchFiles(self,component):
34  newfiles = []
35  component._preprocessor_tempFiles = []
36  for fn in component.files:
37  if self.prefetch and fn.startswith("root://"):
38  (newfile,istemp) = self.prefetchOneXrootdFile(fn)
39  newfiles.append(newfile)
40  if istemp:
41  component._preprocessor_tempFiles.append(newfile)
42  else:
43  newfiles.append(fn)
44  component.files = newfiles
def cmsswPreprocessor.CmsswPreprocessor.prefetchOneXrootdFile (   self,
  fname 
)

Definition at line 19 of file cmsswPreprocessor.py.

References join(), and python.rootplot.root2matplotlib.replace().

Referenced by cmsswPreprocessor.CmsswPreprocessor.maybePrefetchFiles().

19  def prefetchOneXrootdFile(self,fname):
20  tmpdir = os.environ['TMPDIR'] if 'TMPDIR' in os.environ else "/tmp"
21  rndchars = "".join([hex(ord(i))[2:] for i in os.urandom(8)])
22  localfile = "%s/%s-%s.root" % (tmpdir, os.path.basename(fname).replace(".root",""), rndchars)
23  try:
24  print "Fetching %s to local path %s " % (fname,localfile)
25  start = timeit.default_timer()
26  subprocess.check_output(["xrdcp","-f","-N",fname,localfile])
27  print "Time used for transferring the file locally: %s s" % (timeit.default_timer() - start)
28  return (localfile,True)
29  except:
30  print "Could not save file locally, will run from remote"
31  if os.path.exists(localfile): os.remove(localfile) # delete in case of incomplete transfer
32  return (fname,False)
def replace(string, replacements)
static std::string join(char **cmd)
Definition: RemoteFile.cc:18
def cmsswPreprocessor.CmsswPreprocessor.run (   self,
  component,
  wd,
  firstEvent,
  nEvents 
)

Definition at line 50 of file cmsswPreprocessor.py.

References cmsswPreprocessor.CmsswPreprocessor.addOrigAsSecondary, runall.testit.command, cmsswPreprocessor.CmsswPreprocessor.command, WorkFlow.WorkFlowBlock.command, cmsswPreprocessor.CmsswPreprocessor.configFile, XMLConfigReader.configFile, edmUtils.edmFileLs(), cmsRelvalreport.exit, objects.autophobj.float, createfilelist.int, cmsswPreprocessor.CmsswPreprocessor.maybePrefetchFiles(), FileExportPlugin.FileExportPlugin.options, cmsswPreprocessor.CmsswPreprocessor.options, DOTExport.DotProducer.options, and confdb.HLTProcess.options.

50  def run(self,component,wd,firstEvent,nEvents):
51  if firstEvent != 0: raise RuntimeError("The preprocessor can't skip events at the moment")
52  fineSplitIndex, fineSplitFactor = getattr(component, 'fineSplit', (1,1))
53  if fineSplitFactor > 1:
54  if len(component.files) != 1:
55  raise RuntimeError("Any component with fineSplit > 1 is supposed to have just a single file, while %s has %s" % (component.name, component.files))
56  evtsInFile = edmFileLs(component.files[0])['events']
57  if nEvents in (None, -1) or nEvents > evtsInFile: nEvents = evtsInFile
58  nEvents = int(ceil(nEvents/float(fineSplitFactor)))
59  firstEvent = fineSplitIndex * nEvents
60  # Now we will run on these events, and the output will contain only those
61  # Thus, we switch off fine-split in the component
62  component.fineSplit = (1,1)
63  if nEvents is None:
64  nEvents = -1
65  self.maybePrefetchFiles(component)
66  cmsswConfig = imp.load_source("cmsRunProcess",os.path.expandvars(self.configFile))
67  inputfiles= []
68  for fn in component.files :
69  if not re.match("file:.*",fn) and not re.match("root:.*",fn) :
70  fn="file:"+fn
71  inputfiles.append(fn)
72 
73  # Four cases:
74  # - no options, cmsswConfig with initialize function
75  # run initialize with default parameters
76  # - filled options, cmsswConfig with initialize function
77  # pass on options to initialize
78  # - no options, classic cmsswConfig
79  # legacy mode
80  # - filled options, classic cmsswConfig
81  # legacy mode but warn that options are not passed on
82 
83  if hasattr(cmsswConfig, "initialize"):
84  if len(self.options) == 0:
85  cmsswConfig.process = cmsswConfig.initialize()
86  else:
87  cmsswConfig.process = cmsswConfig.initialize(**self.options)
88  else:
89  if len(self.options) == 0:
90  pass
91  else:
92  print "WARNING: cmsswPreprocessor received options but can't pass on to cmsswConfig"
93 
94  cmsswConfig.process.source.fileNames = inputfiles
95  # cmsRun will not create the output file if maxEvents==0, leading to crash of the analysis downstream.
96  # Thus, we set nEvents = 1 if the input file is empty (the output file will be empty as well).
97  cmsswConfig.process.maxEvents.input = 1 if (fineSplitFactor>1 and nEvents==0) else nEvents
98  cmsswConfig.process.source.skipEvents = cmsswConfig.cms.untracked.uint32(0 if (fineSplitFactor>1 and nEvents==0) else firstEvent)
99  #fixme: implement skipEvent / firstevent
100 
101  outfilename=wd+"/cmsswPreProcessing.root"
102  # for outName in cmsswConfig.process.endpath.moduleNames():
103  for module in cmsswConfig.process.endpaths.viewvalues():
104  for outName in module.moduleNames():
105  out = getattr(cmsswConfig.process,outName)
106  if not hasattr(out,"fileName"): continue
107  out.fileName = outfilename
108 
109  if not hasattr(component,"options"):
110  component.options = CFG(name="postCmsrunOptions")
111  #use original as primary and new as secondary
112  #component.options.inputFiles= component.files
113  #component.options.secondaryInputFiles=[outfilename]
114 
115  #use new as primary and original as secondary
116  if self.addOrigAsSecondary:
117  component.options.secondaryInputFiles= component.files
118  component.options.inputFiles=[outfilename]
119  component.files=[outfilename]
120 
121  configfile=wd+"/cmsRun_config.py"
122  f = open(configfile, 'w')
123  f.write(cmsswConfig.process.dumpPython())
124  f.close()
125  runstring="%s %s >& %s/cmsRun.log" % (self.command,configfile,wd)
126  print "Running pre-processor: %s " %runstring
127  ret=os.system(runstring)
128  if ret != 0:
129  print "CMSRUN failed"
130  exit(ret)
131  return component

Member Data Documentation

cmsswPreprocessor.CmsswPreprocessor.addOrigAsSecondary

Definition at line 14 of file cmsswPreprocessor.py.

Referenced by cmsswPreprocessor.CmsswPreprocessor.run().

cmsswPreprocessor.CmsswPreprocessor.configFile

Definition at line 12 of file cmsswPreprocessor.py.

Referenced by cmsswPreprocessor.CmsswPreprocessor.run().

cmsswPreprocessor.CmsswPreprocessor.garbageFiles

Definition at line 16 of file cmsswPreprocessor.py.

cmsswPreprocessor.CmsswPreprocessor.prefetch