Reference Manual

Variables
dictionary	renaming

Function Documentation

def web.app_utils.db_list_with_releases ( path = '.' )

Returns available database list and their releases.

Definition at line 150 of file app_utils.py.

References web.app_utils.get_release_list(), and join().

Referenced by web.dbfile2html.dbfile2html(), and web.browse_db.BrowseDB.default().

 
 def db_list_with_releases(path='.'):
     '''Returns available database list and their releases.'''
     db_list = [db for db in listdir(path) if db.endswith('.db')]
     db_list_with_releases = []
     for db in db_list:
         conn = sqlite3.connect(join(path, db))
         releases = get_release_list(conn.cursor())
         db_list_with_releases.append((db[:-3], releases))
         conn.close()
     return db_list_with_releases
 
 # -------------------     Template Context generators     --------------------

web.app_utils.db_list_with_releases

def db_list_with_releases

Definition: app_utils.py:150

join

static std::string join(char **cmd)

Definition: RemoteFile.cc:18

web.app_utils.get_release_list

def get_release_list

Definition: app_utils.py:144

def web.app_utils.get_dataset_name ( name )

Returns extracted dataset name from the given ROOT filename.

Definition at line 67 of file app_utils.py.

References join().

Referenced by web.app_utils.get_directory_summary_stats(), and web.app_utils.get_folders().

 
 def get_dataset_name(name):
     '''Returns extracted dataset name from the given ROOT filename.'''
     if re.search('RelVal', name):
         run = str(int(re.findall('_R(\d{9})_', name)[0]))
         ds = re.findall('GR_R_\d*_V\d*C?_(?:RelVal)?_([\w\d]*-v\d+)_', name)[0]
     else:
         run, ds = re.findall('R(\d{9})__([\w\d]*)__CMSSW_', name)[0:1]
     return '_'.join([ds, str(int(run))])
 

web.app_utils.get_dataset_name

def get_dataset_name

Definition: app_utils.py:67

join

static std::string join(char **cmd)

Definition: RemoteFile.cc:18

def web.app_utils.get_directory_summary_stats	(	c,
		url_args,
		file_id,
		threshold
	)

Returns context for ``directory_summary.html`` template.

Definition at line 283 of file app_utils.py.

References cmsPerfStripChart.dict, web.app_utils.get_dataset_name(), web.app_utils.get_img_url(), web.app_utils.get_percentage(), web.app_utils.get_release(), web.app_utils.get_stats(), and join().

Referenced by web.dbfile2html.dbfile2html(), and web.browse_db.BrowseDB.default().

 
 def get_directory_summary_stats(c, url_args, file_id, threshold):
     '''Returns context for ``directory_summary.html`` template.'''
     context = dict()
     c.execute('''SELECT directory_id, filename1, filename2 FROM RootFileComparison
                  WHERE id = ?''', (file_id,))
     dir_id, f1, f2 = c.fetchone()
     context['release1'] = get_release(f1)
     context['release2'] = get_release(f2)
     if not url_args:
         dir_name = get_dataset_name(f1)
     else:
         #### Select DQMData/Run directory.
         directory_names = []
 
         for dir_name in url_args:
             c.execute('''SELECT id, name FROM Directory WHERE name = ? AND
                     parent_id = ?''', (dir_name, dir_id))
             dir_id, name = c.fetchone()
             directory_names.append(name)
         context['parent_name'] = '/'.join(directory_names)
 
     ## Select stats
     c.execute('''SELECT from_histogram_id, till_histogram_id FROM
                  Directory WHERE id = ?''', (dir_id,))
     ranges = c.fetchone()
     successes, nulls, fails = get_stats(c, threshold, (ranges,))
     success, null, fail = get_percentage(successes, nulls, fails)
     context.update({
             'successes': successes, 'nulls': nulls, 'fails': fails,
             'success': success, 'null': null, 'fail': fail,
             'total': successes + nulls + fails, 'dir_name': dir_name
         })
     # subdirs: name, total, success, fail, null
     c.execute('''SELECT name, from_histogram_id, till_histogram_id FROM Directory
                  WHERE parent_id = ?''', (dir_id,))
     subdirs = c.fetchall()
     subdir_stats = []
     for name, from_id, till_id in subdirs:
         successes, nulls, fails = get_stats(c, threshold, [(from_id, till_id,)])
         success, null, fail = get_percentage(successes, nulls, fails)
         subdir_stats.append((name, successes + nulls + fails, successes,
                              nulls, fails, success, null, fail))
     context['subdirs'] = sorted(subdir_stats, key=lambda x: x[4], reverse=True)
 
     # histograms: name, p_value
     c.execute('''SELECT name, p_value FROM HistogramComparison
                  WHERE directory_id = ?''', (dir_id,))
     failed_histos = []
     successful_histos = []
     null_histos = []
     for name, p_value in c.fetchall():
         path = quote('%s/%s' % ('/'.join(url_args), name))
         url1 = get_img_url(path, f1)
         url2 = get_img_url(path, f2)
         overlay = get_img_url(path, f1, f2)
         if p_value < 0:
             null_histos.append((name, p_value, url1, url2, overlay))
         elif p_value <= threshold:
             failed_histos.append((name, p_value, url1, url2, overlay))
         else:
             successful_histos.append((name, p_value, url1, url2, overlay))
 
     context['failed_histos'] = sorted(failed_histos, key=lambda x: x[1], reverse=True)
     context['null_histos'] = null_histos
     context['successful_histos'] = sorted(successful_histos, key=lambda x: x[1], reverse=True)
     return context

def web.app_utils.get_folders	(	c,
		file_id,
		filename,
		dir_id,
		threshold
	)

Returns file folder stats for one "summary table" column.

Definition at line 113 of file app_utils.py.

References bitset_utilities.append(), cmsPerfStripChart.dict, web.app_utils.get_dataset_name(), and web.app_utils.get_stats().

Referenced by web.app_utils.get_release_summary_stats().

 
 def get_folders(c, file_id, filename, dir_id, threshold):  # TODO: If folder [Egamma|JetMet] analyse their subdirs
     '''Returns file folder stats for one "summary table" column.'''
     ds_name = get_dataset_name(filename)
     c.execute('''SELECT name, from_histogram_id, till_histogram_id FROM
                  Directory WHERE parent_id=?''', (dir_id,))
     dirs = c.fetchall()
     file_folders = dict()
     total_successes, total_nulls, total_fails = 0, 0, 0
     for name, from_id, till_id in dirs:
         successes, nulls, fails = get_stats(c, threshold, ((from_id, till_id),))
         total_successes += successes
         total_nulls += nulls
         total_fails += fails
         if name in file_folders:
             file_folders[name].append([file_id, ds_name, successes, nulls, fails])
         else:
             file_folders[name] = [file_id, ds_name, successes, nulls, fails]
     return [('Summary', [file_id, ds_name, total_successes, total_nulls, total_fails])] + file_folders.items()
 

web.app_utils.get_stats

def get_stats

Definition: app_utils.py:82

bitset_utilities::append

boost::dynamic_bitset append(const boost::dynamic_bitset<> &bs1, const boost::dynamic_bitset<> &bs2)

this method takes two bitsets bs1 and bs2 and returns result of bs2 appended to the end of bs1 ...

Definition: bitset_append.cc:10

cmsPerfStripChart.dict

tuple dict

Definition: cmsPerfStripChart.py:307

web.app_utils.get_folders

def get_folders

Definition: app_utils.py:113

web.app_utils.get_dataset_name

def get_dataset_name

Definition: app_utils.py:67

def web.app_utils.get_img_path	(	filename,
		path
	)

Returns image path for https://cmsweb.cern.ch/dqm histogram
visualisation service

Definition at line 48 of file app_utils.py.

Referenced by web.app_utils.get_img_url().

 
 def get_img_path(filename, path):
     '''Returns image path for https://cmsweb.cern.ch/dqm histogram
     visualisation service'''
     run = int(re.findall('_R(\d*)__', filename)[0])
     parts = [e.rstrip('.root') for e in filename.split('__')]
     path = path.replace('Run summary/', '')
     return 'archive/%s/%s/%s/%s/%s' % (run, parts[1], parts[2], parts[3], path)
 

web.app_utils.get_img_path

def get_img_path

Definition: app_utils.py:48

def web.app_utils.get_img_url	(	path,
		f1,
		f2 = `None`,
		w = `250`,
		h = `250`
	)

Returns full URL of histogram (or histogram overlay) image for
https://cmsweb.cern.ch/dqm visualisation service.

Definition at line 57 of file app_utils.py.

References web.app_utils.get_img_path().

Referenced by web.app_utils.get_directory_summary_stats().

 
 def get_img_url(path, f1, f2=None, w=250, h=250):
     '''Returns full URL of histogram (or histogram overlay) image for
     https://cmsweb.cern.ch/dqm visualisation service.'''
     base = 'https://cmsweb.cern.ch/dqm/relval/plotfairy'
     if not f2:
         return '%s/%s?w=%s;h=%s' % (base, get_img_path(f1, path), w, h)
     return '%s/overlay?obj=%s;obj=%s;w=%s;h=%s' % (base,
                  get_img_path(f1, path), get_img_path(f2, path), w, h)
 

web.app_utils.get_img_url

def get_img_url

Definition: app_utils.py:57

web.app_utils.get_img_path

def get_img_path

Definition: app_utils.py:48

def web.app_utils.get_percentage	(	successes,
		nulls,
		fails
	)

Converts integers ``successes``, ``nulls`` and ``fails`` to percents.

Definition at line 100 of file app_utils.py.

Referenced by web.app_utils.get_directory_summary_stats(), and web.app_utils.get_release_summary_stats().

 
 def get_percentage(successes, nulls, fails):
     '''Converts integers ``successes``, ``nulls`` and ``fails`` to percents.'''
     if successes is None:
         return None, None, None
     total = successes + fails + nulls
     if not total:
         return None, None, None
     success =  round(100. * successes / total, 2)
     null =  round(100. * nulls / total, 2)
     fail =  round(100. * fails / total, 2)
     return success, null, fail
 

web.app_utils.get_percentage

def get_percentage

Definition: app_utils.py:100

def web.app_utils.get_release ( name )

Returns extracted release from the given ROOT filename.

Definition at line 77 of file app_utils.py.

Referenced by web.app_utils.get_directory_summary_stats().

 
 def get_release(name):
     '''Returns extracted release from the given ROOT filename.'''
     return re.findall('R\d{9}__([\w\d_-]*)__DQM.root', name)[0]
 

web.app_utils.get_release

def get_release

Definition: app_utils.py:77

def web.app_utils.get_release_list ( c )

Returns all ``ReleaseComparisons`` found on database.

Definition at line 144 of file app_utils.py.

Referenced by web.app_utils.db_list_with_releases(), and web.browse_db.BrowseDB.default().

 
 def get_release_list(c):
     '''Returns all ``ReleaseComparisons`` found on database.'''
     c.execute('SELECT title, statistical_test FROM ReleaseComparison')
     return c.fetchall()
 

web.app_utils.get_release_list

def get_release_list

Definition: app_utils.py:144

def web.app_utils.get_release_summary_stats	(	c,
		release_title,
		st_test,
		threshold = `1e-5`
	)

Returns context for ``release_summary.html`` template.

Definition at line 163 of file app_utils.py.

References bitset_utilities.append(), cmsPerfStripChart.dict, web.app_utils.get_folders(), web.app_utils.get_percentage(), and web.app_utils.get_stats().

Referenced by web.dbfile2html.dbfile2html(), and web.browse_db.BrowseDB.default().

 
 def get_release_summary_stats(c, release_title, st_test, threshold=1e-5):
     '''Returns context for ``release_summary.html`` template.'''
     ## Summary
     context = dict()
     c.execute('''SELECT release1, release2, id FROM ReleaseComparison
                  WHERE title = ? AND statistical_test = ?''', (release_title, st_test))
     context['release1'], context['release2'], release_comp_id = c.fetchone()
 
     # All directory ranges
     c.execute('''SELECT from_histogram_id, till_histogram_id FROM Directory
                    WHERE id IN (SELECT directory_id FROM RootFileComparison
                    WHERE release_comparison_id = ?)''', (release_comp_id,))
     dir_ranges = c.fetchall()
 
     if len(dir_ranges) > 1:
         dir_ranges = reduce(join_ranges, dir_ranges)
 
     context['successes'], context['nulls'], context['fails'], = get_stats(c, threshold, dir_ranges)
 
     context['total'] = context['successes'] + context['fails'] + context['nulls']
     if context['total']:
         context['success'], context['null'], context['fail'] = \
             get_percentage(context['successes'], context['nulls'], context['fails'])
 
     ## Data needed for the all the statistics:
     c.execute('''SELECT id, filename1, directory_id FROM RootFileComparison
                  WHERE release_comparison_id = ?''', (release_comp_id,))
     files = c.fetchall()
 
     ## folders: [(folder_name, [folder: (file_id, filename, success, null, fail)]), ...]
     folders = dict()
     for file_id, filename, dir_id in files:
         # file_folders: [(folder_name, [(file_id, file_name, success, null, fail)]), ...]
         file_folders = get_folders(c, file_id, filename, dir_id, threshold)
         for folder_name, file_folder_stats in file_folders:
             if folder_name in folders:
                 # Add folder stats
                 folders[folder_name].append(file_folder_stats)
                 # Update folder summary
                 folders[folder_name][0][2] += file_folder_stats[2]
                 folders[folder_name][0][3] += file_folder_stats[3]
                 folders[folder_name][0][4] += file_folder_stats[4]
             else:
                 folder_summary = [None, 'Summary', file_folder_stats[2],
                                     file_folder_stats[3], file_folder_stats[4]]
                 folders[folder_name] = [folder_summary, file_folder_stats]
 
     ## Calculate ratios
     folders = [('Summary', folders.pop('Summary'))] + sorted(folders.items(), key=lambda x: x[0])
     for folder, file_stats in folders:
         # Insert N/A if histo is missing
         if len(file_stats) != len(files)+1:
             for i, file_ in enumerate(files):
                 if file_[0] != file_stats[i][0]:
                     file_stats = file_stats[:i] + [[None, "N/A", None, None, None]] + file_stats[i:]
         # Count the ratios
         for i, stats in enumerate(file_stats):
             stats[2], stats[3], stats[4] = get_percentage(*stats[2:5])
     context['folders'] = folders
 
 
     ## Select Summary Barchart, Detailed Barchart
     for folder in folders:
         print folder
     #   detailed_ratios: (name, success_ratio)
     #   summary_ratios: (name, success_ratio)
 
 
     ## Summary Barchart
     # TODO: optimise not to fetch from DB again.
     c.execute('''SELECT name, from_histogram_id, till_histogram_id FROM Directory
                  WHERE parent_id IN (SELECT directory_id FROM RootFileComparison
                  WHERE release_comparison_id = ?)''', (release_comp_id,))
     lvl3_dir_ranges = c.fetchall()
 
     cum_lvl3_dir_ranges = dict()
     for name, from_id, till_id in lvl3_dir_ranges:
         if name in cum_lvl3_dir_ranges:
             cum_lvl3_dir_ranges[name].append((from_id, till_id))
         else:
             cum_lvl3_dir_ranges[name] = [(from_id, till_id)]
 
     # Fetch stats
     summary_stats = dict()
     detailed_stats = dict()
     for name, ranges in cum_lvl3_dir_ranges.iteritems():
         successes, nulls, fails = get_stats(c, threshold, ranges)
         if name in detailed_stats:
             detailed_stats[name][0] += successes
             detailed_stats[name][1] += nulls
             detailed_stats[name][2] += fails
         else:
             detailed_stats[name] = [successes, nulls, fails]
         if name in renaming:
             if renaming[name] in summary_stats:
                 summary_stats[renaming[name]][0] += successes
                 summary_stats[renaming[name]][1] += nulls
                 summary_stats[renaming[name]][2] += fails
             else:
                 summary_stats[renaming[name]] = [successes, nulls, fails]
 
     # Calculate ratio
     summary_ratios = []
     for name, stats in summary_stats.iteritems():
         total = sum(stats)
         if total:
             ratio = float(stats[0]) / sum(stats)
             summary_ratios.append((name, ratio))
     detailed_ratios = []
     for name, stats in detailed_stats.iteritems():
         total = sum(stats)
         if total:
             ratio = float(stats[0]) / sum(stats)
             detailed_ratios.append((name, ratio))
 
     context['summary_ratios'] = sorted(summary_ratios, key=lambda x: x[0])
     context['detailed_ratios'] = sorted(detailed_ratios, key=lambda x: x[0])
     return context
 

web.app_utils.get_stats

def get_stats

Definition: app_utils.py:82

bitset_utilities::append

boost::dynamic_bitset append(const boost::dynamic_bitset<> &bs1, const boost::dynamic_bitset<> &bs2)

this method takes two bitsets bs1 and bs2 and returns result of bs2 appended to the end of bs1 ...

Definition: bitset_append.cc:10

web.app_utils.get_release_summary_stats

def get_release_summary_stats

Definition: app_utils.py:163

cmsPerfStripChart.dict

tuple dict

Definition: cmsPerfStripChart.py:307

web.app_utils.get_folders

def get_folders

Definition: app_utils.py:113

web.app_utils.get_percentage

def get_percentage

Definition: app_utils.py:100

def web.app_utils.get_stats	(	c,
		threshold,
		dir_ranges
	)

Returns ``successes``, ``fails``, ``nulls`` for the given dir_ranges.

Definition at line 82 of file app_utils.py.

Referenced by web.app_utils.get_directory_summary_stats(), web.app_utils.get_folders(), and web.app_utils.get_release_summary_stats().

 
 def get_stats(c, threshold, dir_ranges):
     '''Returns ``successes``, ``fails``, ``nulls`` for the given dir_ranges.'''
     successes, nulls, fails = 0, 0, 0
     for from_id, till_id in dir_ranges:
         c.execute('''SELECT count(*) FROM HistogramComparison
                      WHERE p_value >= 0 AND p_value > ? AND
                      id >= ? and id <= ?''', (threshold, from_id, till_id))
         successes += c.fetchone()[0]
         c.execute('''SELECT count(*) FROM HistogramComparison WHERE
                      p_value < 0 AND id >= ? AND id <= ?''', (from_id, till_id))
         nulls += c.fetchone()[0]
         c.execute('''SELECT count(*) FROM HistogramComparison
                      WHERE p_value >= 0 AND p_value <= ? AND
                      id >= ? AND id <= ?''', (threshold, from_id, till_id))
         fails += c.fetchone()[0]
     return successes, nulls, fails
 

web.app_utils.get_stats

def get_stats

Definition: app_utils.py:82

def web.app_utils.join_ranges	(	ranges,
		elem
	)

To do less DB calls, joins [(from_id, till_id), ...] ranges.

Definition at line 133 of file app_utils.py.

 
 def join_ranges(ranges, elem):
     '''To do less DB calls, joins [(from_id, till_id), ...] ranges.'''
     if type(ranges) == tuple:
         ranges = [ranges]
     if ranges[-1][-1] + 1 == elem[0]:
         ranges[-1] = (ranges[-1][0], elem[1])
     else:
         ranges.append(elem)
     return ranges
 

web.app_utils.join_ranges

def join_ranges

Definition: app_utils.py:133

Variable Documentation

dictionary web.app_utils.renaming

Initial value:

 = {
         'MessageLogger': 'Miscellanea', 'FourVector': 'Generic',
         'Castor': 'Castor Calorimeter', 'RPCDigisV': 'Resistive Plate Chambers',
         'GlobalRecHitsV': 'Miscellanea: Sim.', 'Top': 'Top', 'HLTJETMET': 'JetMet',
         'GlobalDigisV': 'Miscellanea: Sim.', 'L1TEMU': 'Level 1 Trigger',
         'TrackerRecHitsV': 'Tracking System', 'MuonDTHitsV': 'Muon Objects',
         'EcalDigisV': 'Ecal Calorimeter', 'EcalHitsV': 'Ecal Calorimeter',
         'Muons': 'Muon Objects', 'DT': 'Drift Tubes', 'TrackerDigisV': 'Tracking System',
         'Pixel': 'Tracking System', 'EcalPreshower': 'Ecal Calorimeter',
         'EgammaV': 'Photons', 'AlCaEcalPi0': 'Alca', 'SusyExo': 'SusyExo',
         'MuonDTDigisV': 'Muon Objects', 'TauRelVal': 'Tau',
         'HcalHitsV': 'Hcal Calorimeter', 'RPC': 'Resistive Plate Chambers',
         'EcalRecHitsV': 'Ecal Calorimeter', 'EgOffline': 'EGamma',
         'MuonCSCDigisV': 'Muon Objects', 'ParticleFlow': 'Miscellanea',
         'Info': 'Miscellanea', 'Tracking': 'Tracking',
         'NoiseRatesV': 'Miscellanea: Sim.', 'Generator': 'Miscellanea: Sim.',
         'Btag': 'B Tagging', 'Higgs': 'Higgs', 'GlobalHitsV': 'Miscellanea: Sim.',
         'HcalRecHitsV': 'Hcal Calorimeter', 'TrackerHitsV': 'Tracking System',
         'CSC': 'Cathode Strip Chambers', 'Muon,HLTMonMuon': 'Muon',
         'Hcal': 'Hcal Calorimeter', 'TauOffline': 'Tau',
         'HeavyFlavor': 'HeavyFlavor', 'JetMET': 'Jet', 'Physics': 'Miscellanea',
         'CaloTowersV': 'Hcal Calorimeter', 'SiStrip': 'Tracking System',
         'EcalClusterV': 'Ecal Calorimeter', 'HLTEgammaValidation': 'EGamma',
         'EcalPhiSym': 'Alca', 'L1T': 'Level 1 Trigger', 'MixingV': 'Miscellanea: Sim.',
         'FourVector_Val': 'Generic', 'EcalEndcap': 'Ecal Calorimeter',
         'TauOnline': 'Tau', 'Egamma': 'Photons', 'HcalIsoTrack': 'Alca',
         'EcalBarrel': 'Ecal Calorimeter'
 }

Definition at line 18 of file app_utils.py.

Functions
def	db_list_with_releases

def	get_dataset_name

def	get_directory_summary_stats

def	get_folders

def	get_img_path

def	get_img_url

def	get_percentage

def	get_release

def	get_release_list

def	get_release_summary_stats

def	get_stats

def	join_ranges

Functions

Variables

Function Documentation

Variable Documentation