DataMixingSiPixelMCDigiWorker.cc

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// File: DataMixingSiPixelWorker.cc
// Description:  see DataMixingSiPixelMCDigiWorker.h
// Author:  Mike Hildreth, University of Notre Dame
//
//--------------------------------------------

#include <map>
#include <memory>
#include "FWCore/MessageLogger/interface/MessageLogger.h"
#include "FWCore/Utilities/interface/EDMException.h"
#include "FWCore/Framework/interface/ConstProductRegistry.h"
#include "FWCore/ServiceRegistry/interface/Service.h"
#include "DataFormats/Common/interface/Handle.h"
#include "DataFormats/Provenance/interface/Provenance.h"
#include "DataFormats/Provenance/interface/BranchDescription.h"
//
//

#include "Geometry/Records/interface/TrackerDigiGeometryRecord.h"
#include "Geometry/TrackerGeometryBuilder/interface/PixelGeomDetUnit.h"
#include "Geometry/TrackerGeometryBuilder/interface/TrackerGeometry.h"
#include "Geometry/CommonTopologies/interface/PixelTopology.h"
#include "Geometry/TrackerGeometryBuilder/interface/PixelGeomDetType.h"
#include "DataFormats/TrackerCommon/interface/TrackerTopology.h"
#include "CondFormats/SiPixelObjects/interface/PixelIndices.h"

#include "CLHEP/Random/RandFlat.h"

#include "DataMixingSiPixelMCDigiWorker.h"


using namespace std;

namespace edm
{

  // Virtual constructor

  //  DataMixingSiPixelMCDigiWorker::DataMixingSiPixelMCDigiWorker() { } 

  // Constructor 
  DataMixingSiPixelMCDigiWorker::DataMixingSiPixelMCDigiWorker(const edm::ParameterSet& ps, edm::ConsumesCollector && iC) : 
    label_(ps.getParameter<std::string>("Label")),
    geometryType_(ps.getParameter<std::string>("GeometryType")),
    // get external parameters:
    // To account for upgrade geometries do not assume the number 
    // of layers or disks.
    NumberOfBarrelLayers(ps.exists("NumPixelBarrel")?ps.getParameter<int>("NumPixelBarrel"):3),
    NumberOfEndcapDisks(ps.exists("NumPixelEndcap")?ps.getParameter<int>("NumPixelEndcap"):2),
    //theInstLumiScaleFactor(ps.getParameter<double>("theInstLumiScaleFactor")), //For dynamic inefficiency PU scaling
    //bunchScaleAt25(ps.getParameter<double>("bunchScaleAt25")), //For dynamic inefficiency bunchspace scaling
    // Control the pixel inefficiency
    AddPixelInefficiency(ps.getParameter<bool>("AddPixelInefficiency")),
    pixelEff_(ps, AddPixelInefficiency,NumberOfBarrelLayers,NumberOfEndcapDisks)
  {                                                         

    // get the subdetector names
    //    this->getSubdetectorNames();  //something like this may be useful to check what we are supposed to do...

    // declare the products to produce

    pixeldigi_collectionSig_   = ps.getParameter<edm::InputTag>("pixeldigiCollectionSig");
    pixeldigi_collectionPile_   = ps.getParameter<edm::InputTag>("pixeldigiCollectionPile");
    PixelDigiCollectionDM_  = ps.getParameter<std::string>("PixelDigiCollectionDM");

    PixelDigiToken_ = iC.consumes<edm::DetSetVector<PixelDigi> >(pixeldigi_collectionSig_);
    PixelDigiPToken_ = iC.consumes<edm::DetSetVector<PixelDigi> >(pixeldigi_collectionPile_);

    // clear local storage for this event                                                                     
    SiHitStorage_.clear();

    FirstCall_ = true;

  }
           

  // Virtual destructor needed.
  DataMixingSiPixelMCDigiWorker::~DataMixingSiPixelMCDigiWorker() { 
  }  

  // Need an event initialization

  void DataMixingSiPixelMCDigiWorker::initializeEvent(edm::Event const& e, edm::EventSetup const& iSetup) { 

    iSetup.get<TrackerDigiGeometryRecord>().get(geometryType_, pDD); 
    //edm::ESHandle<TrackerTopology> tTopoHand;
    //iSetup.get<IdealGeometryRecord>().get(tTopoHand);
    //const TrackerTopology *tTopo=tTopoHand.product();
  }                    


  DataMixingSiPixelMCDigiWorker::PixelEfficiencies::PixelEfficiencies(const edm::ParameterSet& conf, bool AddPixelInefficiency, int NumberOfBarrelLayers, int NumberOfEndcapDisks) {
  // pixel inefficiency
  // Don't use Hard coded values, read inefficiencies in from DB/python config or don't use any
  int NumberOfTotLayers = NumberOfBarrelLayers + NumberOfEndcapDisks;
  FPixIndex=NumberOfBarrelLayers;
  if (AddPixelInefficiency){
    FromConfig = 
      conf.exists("thePixelColEfficiency_BPix1") && conf.exists("thePixelColEfficiency_BPix2") && conf.exists("thePixelColEfficiency_BPix3") &&
      conf.exists("thePixelColEfficiency_FPix1") && conf.exists("thePixelColEfficiency_FPix2") &&
      conf.exists("thePixelEfficiency_BPix1") && conf.exists("thePixelEfficiency_BPix2") && conf.exists("thePixelEfficiency_BPix3") &&
      conf.exists("thePixelEfficiency_FPix1") && conf.exists("thePixelEfficiency_FPix2") &&
      conf.exists("thePixelChipEfficiency_BPix1") && conf.exists("thePixelChipEfficiency_BPix2") && conf.exists("thePixelChipEfficiency_BPix3") &&
      conf.exists("thePixelChipEfficiency_FPix1") && conf.exists("thePixelChipEfficiency_FPix2");
    if (NumberOfBarrelLayers==3) FromConfig = FromConfig && conf.exists("theLadderEfficiency_BPix1") && conf.exists("theLadderEfficiency_BPix2") && conf.exists("theLadderEfficiency_BPix3") &&
      conf.exists("theModuleEfficiency_BPix1") && conf.exists("theModuleEfficiency_BPix2") && conf.exists("theModuleEfficiency_BPix3") &&
      conf.exists("thePUEfficiency_BPix1") && conf.exists("thePUEfficiency_BPix2") && conf.exists("thePUEfficiency_BPix3") &&
      conf.exists("theInnerEfficiency_FPix1") && conf.exists("theInnerEfficiency_FPix2") &&
      conf.exists("theOuterEfficiency_FPix1") && conf.exists("theOuterEfficiency_FPix2") &&
      conf.exists("thePUEfficiency_FPix_Inner") && conf.exists("thePUEfficiency_FPix_Outer") &&
      conf.exists("theInstLumiScaleFactor");
    if (NumberOfBarrelLayers>=4) FromConfig = FromConfig && conf.exists("thePixelColEfficiency_BPix4") &&
      conf.exists("thePixelEfficiency_BPix4") && conf.exists("thePixelChipEfficiency_BPix4");
    if (NumberOfEndcapDisks>=3) FromConfig = FromConfig && conf.exists("thePixelColEfficiency_FPix4") &&
      conf.exists("thePixelEfficiency_FPix3") && conf.exists("thePixelChipEfficiency_FPix3");
    if (FromConfig) {
      LogInfo ("PixelDigitizer ") <<"The PixelDigitizer inefficiency configuration is read from the config file.\n";
      theInstLumiScaleFactor = conf.getParameter<double>("theInstLumiScaleFactor");
      int i=0;
      thePixelColEfficiency[i++] = conf.getParameter<double>("thePixelColEfficiency_BPix1");
      thePixelColEfficiency[i++] = conf.getParameter<double>("thePixelColEfficiency_BPix2");
      thePixelColEfficiency[i++] = conf.getParameter<double>("thePixelColEfficiency_BPix3");
      if (NumberOfBarrelLayers>=4){thePixelColEfficiency[i++] = conf.getParameter<double>("thePixelColEfficiency_BPix4");}
      //
      i=0;
      thePixelEfficiency[i++] = conf.getParameter<double>("thePixelEfficiency_BPix1");
      thePixelEfficiency[i++] = conf.getParameter<double>("thePixelEfficiency_BPix2");
      thePixelEfficiency[i++] = conf.getParameter<double>("thePixelEfficiency_BPix3");
      if (NumberOfBarrelLayers>=4){thePixelEfficiency[i++] = conf.getParameter<double>("thePixelEfficiency_BPix4");}
      //
      i=0;
      thePixelChipEfficiency[i++] = conf.getParameter<double>("thePixelChipEfficiency_BPix1");
      thePixelChipEfficiency[i++] = conf.getParameter<double>("thePixelChipEfficiency_BPix2");
      thePixelChipEfficiency[i++] = conf.getParameter<double>("thePixelChipEfficiency_BPix3");
      if (NumberOfBarrelLayers>=4){thePixelChipEfficiency[i++] = conf.getParameter<double>("thePixelChipEfficiency_BPix4");}
      //
      if (NumberOfBarrelLayers==3){
        i=0;
        theLadderEfficiency_BPix[i++] = conf.getParameter<std::vector<double> >("theLadderEfficiency_BPix1");
        theLadderEfficiency_BPix[i++] = conf.getParameter<std::vector<double> >("theLadderEfficiency_BPix2");
        theLadderEfficiency_BPix[i++] = conf.getParameter<std::vector<double> >("theLadderEfficiency_BPix3");
        if ( ((theLadderEfficiency_BPix[0].size()!=20) || (theLadderEfficiency_BPix[1].size()!=32) ||
              (theLadderEfficiency_BPix[2].size()!=44)) && (NumberOfBarrelLayers==3) )  
          throw cms::Exception("Configuration") << "Wrong ladder number in efficiency config!";
        //           
        i=0;
        theModuleEfficiency_BPix[i++] = conf.getParameter<std::vector<double> >("theModuleEfficiency_BPix1");
        theModuleEfficiency_BPix[i++] = conf.getParameter<std::vector<double> >("theModuleEfficiency_BPix2");
        theModuleEfficiency_BPix[i++] = conf.getParameter<std::vector<double> >("theModuleEfficiency_BPix3");
        if ( ((theModuleEfficiency_BPix[0].size()!=4) || (theModuleEfficiency_BPix[1].size()!=4) ||
              (theModuleEfficiency_BPix[2].size()!=4)) && (NumberOfBarrelLayers==3) )  
          throw cms::Exception("Configuration") << "Wrong module number in efficiency config!";
        //
        thePUEfficiency.push_back(conf.getParameter<std::vector<double> >("thePUEfficiency_BPix1"));
        thePUEfficiency.push_back(conf.getParameter<std::vector<double> >("thePUEfficiency_BPix2"));
        thePUEfficiency.push_back(conf.getParameter<std::vector<double> >("thePUEfficiency_BPix3"));                        
        if ( ((thePUEfficiency[0].size()==0) || (thePUEfficiency[1].size()==0) || 
              (thePUEfficiency[2].size()==0)) && (NumberOfBarrelLayers==3) )
          throw cms::Exception("Configuration") << "At least one PU efficiency (BPix) number is needed in efficiency config!";
      }
      // The next is needed for Phase2 Tracker studies
      if (NumberOfBarrelLayers>=5){
        if (NumberOfTotLayers>20){throw cms::Exception("Configuration") <<"SiPixelDigitizer was given more layers than it can handle";}
        // For Phase2 tracker layers just set the outermost BPix inefficiency to 99.9% THESE VALUES ARE HARDCODED ALSO ELSEWHERE IN THIS FILE
        for (int j=5 ; j<=NumberOfBarrelLayers ; j++){
          thePixelColEfficiency[j-1]=0.999;
          thePixelEfficiency[j-1]=0.999;
          thePixelChipEfficiency[j-1]=0.999;
        }
      }
      //
      i=FPixIndex;
      thePixelColEfficiency[i++]   = conf.getParameter<double>("thePixelColEfficiency_FPix1");
      thePixelColEfficiency[i++]   = conf.getParameter<double>("thePixelColEfficiency_FPix2");
      if (NumberOfEndcapDisks>=3){thePixelColEfficiency[i++]   = conf.getParameter<double>("thePixelColEfficiency_FPix3");}
      i=FPixIndex;
      thePixelEfficiency[i++]      = conf.getParameter<double>("thePixelEfficiency_FPix1");
      thePixelEfficiency[i++]      = conf.getParameter<double>("thePixelEfficiency_FPix2");
      if (NumberOfEndcapDisks>=3){thePixelEfficiency[i++]      = conf.getParameter<double>("thePixelEfficiency_FPix3");}
      i=FPixIndex;
      thePixelChipEfficiency[i++]  = conf.getParameter<double>("thePixelChipEfficiency_FPix1");
      thePixelChipEfficiency[i++]  = conf.getParameter<double>("thePixelChipEfficiency_FPix2");
      if (NumberOfEndcapDisks>=3){thePixelChipEfficiency[i++]  = conf.getParameter<double>("thePixelChipEfficiency_FPix3");}
      // The next is needed for Phase2 Tracker studies
      if (NumberOfEndcapDisks>=4){
        if (NumberOfTotLayers>20){throw cms::Exception("Configuration") <<"SiPixelDigitizer was given more layers than it can handle";}
        // For Phase2 tracker layers just set the extra FPix disk inefficiency to 99.9% THESE VALUES ARE HARDCODED ALSO ELSEWHERE IN THIS FILE
        for (int j=4+FPixIndex ; j<=NumberOfEndcapDisks+NumberOfBarrelLayers ; j++){
          thePixelColEfficiency[j-1]=0.999;
          thePixelEfficiency[j-1]=0.999;
          thePixelChipEfficiency[j-1]=0.999;
        }
      }
      //FPix Dynamic Inefficiency
      if (NumberOfBarrelLayers==3){
        i=FPixIndex;
        theInnerEfficiency_FPix[i++] = conf.getParameter<double>("theInnerEfficiency_FPix1");
        theInnerEfficiency_FPix[i++] = conf.getParameter<double>("theInnerEfficiency_FPix2");
        i=FPixIndex;
        theOuterEfficiency_FPix[i++] = conf.getParameter<double>("theOuterEfficiency_FPix1");
        theOuterEfficiency_FPix[i++] = conf.getParameter<double>("theOuterEfficiency_FPix2");
        thePUEfficiency.push_back(conf.getParameter<std::vector<double> >("thePUEfficiency_FPix_Inner"));
        thePUEfficiency.push_back(conf.getParameter<std::vector<double> >("thePUEfficiency_FPix_Outer"));
        if ( ((thePUEfficiency[3].size()==0) || (thePUEfficiency[4].size()==0)) && (NumberOfEndcapDisks==2) )
          throw cms::Exception("Configuration") << "At least one (FPix) PU efficiency number is needed in efficiency config!";
        pu_scale.resize(thePUEfficiency.size());
      }
    }
    else LogInfo ("PixelDigitizer ") <<"The PixelDigitizer inefficiency configuration is read from the database.\n";

  }
  // the first "NumberOfBarrelLayers" settings [0],[1], ... , [NumberOfBarrelLayers-1] are for the barrel pixels
  // the next  "NumberOfEndcapDisks"  settings [NumberOfBarrelLayers],[NumberOfBarrelLayers+1], ... [NumberOfEndcapDisks+NumberOfBarrelLayers-1]
}

// Read DynIneff Scale factors from DB
void DataMixingSiPixelMCDigiWorker::init_DynIneffDB(const edm::EventSetup& es, const unsigned int& bunchspace){
  if (AddPixelInefficiency&&!pixelEff_.FromConfig) {
    if (bunchspace == 50) es.get<SiPixelDynamicInefficiencyRcd>().get("50ns",SiPixelDynamicInefficiency_);
    else es.get<SiPixelDynamicInefficiencyRcd>().get(SiPixelDynamicInefficiency_);
    pixelEff_.init_from_db(pDD, SiPixelDynamicInefficiency_);
  }
}

void DataMixingSiPixelMCDigiWorker::PixelEfficiencies::init_from_db(const edm::ESHandle<TrackerGeometry>& geom, const edm::ESHandle<SiPixelDynamicInefficiency>& SiPixelDynamicInefficiency) {

  theInstLumiScaleFactor = SiPixelDynamicInefficiency->gettheInstLumiScaleFactor();
  std::map<uint32_t, double> PixelGeomFactorsDB = SiPixelDynamicInefficiency->getPixelGeomFactors();
  std::map<uint32_t, double> ColGeomFactorsDB = SiPixelDynamicInefficiency->getColGeomFactors();
  std::map<uint32_t, double> ChipGeomFactorsDB = SiPixelDynamicInefficiency->getChipGeomFactors();
  std::map<uint32_t, std::vector<double> > PUFactors = SiPixelDynamicInefficiency->getPUFactors();
  std::vector<uint32_t > DetIdmasks = SiPixelDynamicInefficiency->getDetIdmasks();
  
  // Loop on all modules, calculate geometrical scale factors and store in map for easy access
  for(TrackerGeometry::DetUnitContainer::const_iterator it_module = geom->detUnits().begin(); it_module != geom->detUnits().end(); it_module++) {
    if( dynamic_cast<PixelGeomDetUnit const*>((*it_module))==0) continue;
    const DetId detid = (*it_module)->geographicalId();
    uint32_t rawid = detid.rawId();
    PixelGeomFactors[rawid] = 1;
    ColGeomFactors[rawid] = 1;
    ChipGeomFactors[rawid] = 1;
    for (auto db_factor : PixelGeomFactorsDB) if (matches(detid, DetId(db_factor.first), DetIdmasks)) PixelGeomFactors[rawid] *= db_factor.second;
    for (auto db_factor : ColGeomFactorsDB) if (matches(detid, DetId(db_factor.first), DetIdmasks)) ColGeomFactors[rawid] *= db_factor.second;
    for (auto db_factor : ChipGeomFactorsDB) if (matches(detid, DetId(db_factor.first), DetIdmasks)) ChipGeomFactors[rawid] *= db_factor.second;
  }

  // piluep scale factors are calculated once per event
  // therefore vector index is stored in a map for each module that matches to a db_id
  size_t i=0;
  for (auto factor : PUFactors) {
    const DetId db_id = DetId(factor.first);
    for(TrackerGeometry::DetUnitContainer::const_iterator it_module = geom->detUnits().begin(); it_module != geom->detUnits().end(); it_module++) {
      if( dynamic_cast<PixelGeomDetUnit const*>((*it_module))==0) continue;
      const DetId detid = (*it_module)->geographicalId();
      if (!matches(detid, db_id, DetIdmasks)) continue;
      if (iPU.count(detid.rawId())) {
    throw cms::Exception("Database")<<"Multiple db_ids match to same module in SiPixelDynamicInefficiency DB Object";
      } else {
    iPU[detid.rawId()] = i;
      }
    }
    thePUEfficiency.push_back(factor.second);
    ++i;
  }
  pu_scale.resize(thePUEfficiency.size());
}

bool DataMixingSiPixelMCDigiWorker::PixelEfficiencies::matches(const DetId& detid, const DetId& db_id, const std::vector<uint32_t >& DetIdmasks) {
  if (detid.subdetId() != db_id.subdetId()) return false;
  for (size_t i=0; i<DetIdmasks.size(); ++i) {
    DetId maskid = DetId(DetIdmasks.at(i));
    if (maskid.subdetId() != db_id.subdetId()) continue;
    if ((detid.rawId()&maskid.rawId()) != (db_id.rawId()&maskid.rawId()) && 
    (db_id.rawId()&maskid.rawId()) != DetId(db_id.det(), db_id.subdetId()).rawId()) return false;
  }
  return true;
}




  void DataMixingSiPixelMCDigiWorker::addSiPixelSignals(const edm::Event &e) { 
    // fill in maps of hits

    LogDebug("DataMixingSiPixelMCDigiWorker")<<"===============> adding MC signals for "<<e.id();

    Handle< edm::DetSetVector<PixelDigi> >  input;

    if( e.getByToken(PixelDigiToken_,input) ) {

      //loop on all detsets (detectorIDs) inside the input collection
      edm::DetSetVector<PixelDigi>::const_iterator DSViter=input->begin();
      for (; DSViter!=input->end();DSViter++){

#ifdef DEBUG
    LogDebug("DataMixingSiPixelMCDigiWorker")  << "Processing DetID " << DSViter->id;
#endif

    uint32_t detID = DSViter->id;
    edm::DetSet<PixelDigi>::const_iterator begin =(DSViter->data).begin();
    edm::DetSet<PixelDigi>::const_iterator end   =(DSViter->data).end();
    edm::DetSet<PixelDigi>::const_iterator icopy;
  
    OneDetectorMap LocalMap;

    for (icopy=begin; icopy!=end; icopy++) {
      LocalMap.insert(OneDetectorMap::value_type( (icopy->channel()), *icopy ));
    }

    SiHitStorage_.insert( SiGlobalIndex::value_type( detID, LocalMap ) );
      }
 
    }    
  } // end of addSiPixelSignals



  void DataMixingSiPixelMCDigiWorker::addSiPixelPileups(const int bcr, const EventPrincipal *ep, unsigned int eventNr,
                                                  ModuleCallingContext const* mcc) {
  
    LogDebug("DataMixingSiPixelMCDigiWorker") <<"\n===============> adding pileups from event  "<<ep->id()<<" for bunchcrossing "<<bcr;

    // fill in maps of hits; same code as addSignals, except now applied to the pileup events

    std::shared_ptr<Wrapper<edm::DetSetVector<PixelDigi> >  const> inputPTR =
      getProductByTag<edm::DetSetVector<PixelDigi> >(*ep, pixeldigi_collectionPile_, mcc);

    if(inputPTR ) {

      const edm::DetSetVector<PixelDigi>  *input = const_cast< edm::DetSetVector<PixelDigi> * >(inputPTR->product());



      //   Handle< edm::DetSetVector<PixelDigi> >  input;

      //   if( e->getByLabel(pixeldigi_collectionPile_,input) ) {

      //loop on all detsets (detectorIDs) inside the input collection
      edm::DetSetVector<PixelDigi>::const_iterator DSViter=input->begin();
      for (; DSViter!=input->end();DSViter++){

#ifdef DEBUG
    LogDebug("DataMixingSiPixelMCDigiWorker")  << "Pileups: Processing DetID " << DSViter->id;
#endif

    uint32_t detID = DSViter->id;
    edm::DetSet<PixelDigi>::const_iterator begin =(DSViter->data).begin();
    edm::DetSet<PixelDigi>::const_iterator end   =(DSViter->data).end();
    edm::DetSet<PixelDigi>::const_iterator icopy;

    // find correct local map (or new one) for this detector ID

    SiGlobalIndex::const_iterator itest;

    itest = SiHitStorage_.find(detID);

    if(itest!=SiHitStorage_.end()) {  // this detID already has hits, add to existing map

      OneDetectorMap LocalMap = itest->second;

      // fill in local map with extra channels
      for (icopy=begin; icopy!=end; icopy++) {
        LocalMap.insert(OneDetectorMap::value_type( (icopy->channel()), *icopy ));
      }

      SiHitStorage_[detID]=LocalMap;
      
    }
    else{ // fill local storage with this information, put in global collection

      OneDetectorMap LocalMap;

      for (icopy=begin; icopy!=end; icopy++) {
        LocalMap.insert(OneDetectorMap::value_type( (icopy->channel()), *icopy ));
      }

      SiHitStorage_.insert( SiGlobalIndex::value_type( detID, LocalMap ) );
    }

      }
    }
  }


 
  void DataMixingSiPixelMCDigiWorker::putSiPixel(edm::Event &e, edm::EventSetup const& iSetup, std::vector<PileupSummaryInfo> &ps, int &bs) {

    // collection of Digis to put in the event

    std::vector< edm::DetSet<PixelDigi> > vPixelDigi;

    // loop through our collection of detectors, merging hits and putting new ones in the output

    _signal.clear();

    // big loop over Detector IDs:

    for(SiGlobalIndex::const_iterator IDet = SiHitStorage_.begin();
    IDet != SiHitStorage_.end(); IDet++) {

      uint32_t detID = IDet->first;      

      OneDetectorMap LocalMap = IDet->second;

      signal_map_type Signals;
      Signals.clear();

      //counter variables
      int formerPixel = -1;
      int currentPixel;
      int ADCSum = 0;


      OneDetectorMap::const_iterator iLocalchk;

      for(OneDetectorMap::const_iterator iLocal  = LocalMap.begin();
      iLocal != LocalMap.end(); ++iLocal) {

    currentPixel = iLocal->first; 

    if (currentPixel == formerPixel) { // we have to add these digis together
      ADCSum+=(iLocal->second).adc();
    }
    else{
      if(formerPixel!=-1){             // ADC info stolen from SiStrips...
        if (ADCSum > 511) ADCSum = 255;
        else if (ADCSum > 253 && ADCSum < 512) ADCSum = 254;

        Signals.insert( std::make_pair(formerPixel, ADCSum));
        //PixelDigi aHit(formerPixel, ADCSum);
        //SPD.push_back( aHit );      
      }
      // save pointers for next iteration
      formerPixel = currentPixel;
      ADCSum = (iLocal->second).adc();
    }

    iLocalchk = iLocal;
    if((++iLocalchk) == LocalMap.end()) {  //make sure not to lose the last one
      if (ADCSum > 511) ADCSum = 255;
      else if (ADCSum > 253 && ADCSum < 512) ADCSum = 254;
      Signals.insert( std::make_pair(formerPixel, ADCSum));
      //SPD.push_back( PixelDigi(formerPixel, ADCSum) );      
    } 

      }// end of loop over one detector

      // stick this into the global vector of detector info
      _signal.insert( std::make_pair( detID, Signals));

    } // end of big loop over all detector IDs

    // put the collection of digis in the event   
    LogInfo("DataMixingSiPixelMCDigiWorker") << "total # Merged Pixels: " << _signal.size() ;

    // Now, we have to run Lumi-Dependent efficiency calculation on the merged pixels.
    // This is the only place where we have the PreMixed pileup information so that we can calculate
    // the instantaneous luminosity and do the dynamic inefficiency.

    edm::Service<edm::RandomNumberGenerator> rng;
    CLHEP::HepRandomEngine* engine = &rng->getEngine(e.streamID());

    edm::ESHandle<TrackerTopology> tTopoHand;
    iSetup.get<TrackerTopologyRcd>().get(tTopoHand);
    const TrackerTopology *tTopo=tTopoHand.product();

    // Load inefficiency constants (1st pass), set pileup information.

    if(FirstCall_) {
      init_DynIneffDB(iSetup, bs);
      FirstCall_ = false;
    }

    setPileupInfo(ps, bs);

    for(TrackingGeometry::DetUnitContainer::const_iterator iu = pDD->detUnits().begin(); iu != pDD->detUnits().end(); iu ++){
      
      if((*iu)->type().isTrackerPixel()) {

    //
    const PixelGeomDetUnit* pixdet = dynamic_cast<const PixelGeomDetUnit*>((*iu));
    uint32_t detID = pixdet->geographicalId().rawId();

    // fetch merged hits for this detID

    signal_map_type& theSignal = _signal[detID];

    // if we have some hits...
    if(theSignal.size()>0) {

      edm::DetSet<PixelDigi> SPD(detID);  // make empty vector with this detID so we can push back digis at the end 

      const PixelTopology* topol=&pixdet->specificTopology();
      int numColumns = topol->ncolumns();  // det module number of cols&rows
      int numRows = topol->nrows();

      // do inefficiency calculation, drop some pixel hits

      // Predefined efficiencies
      double pixelEfficiency  = 1.0;
      double columnEfficiency = 1.0;
      double chipEfficiency   = 1.0;

      if (pixelEff_.FromConfig) {
        // setup the chip indices conversion
        if    (pixdet->subDetector()==GeomDetEnumerators::SubDetector::PixelBarrel ||
           pixdet->subDetector()==GeomDetEnumerators::SubDetector::P1PXB){// barrel layers
          int layerIndex=tTopo->layer(detID);
          pixelEfficiency  = pixelEff_.thePixelEfficiency[layerIndex-1];
          columnEfficiency = pixelEff_.thePixelColEfficiency[layerIndex-1];
          chipEfficiency   = pixelEff_.thePixelChipEfficiency[layerIndex-1];
          //std::cout <<"Using BPix columnEfficiency = "<<columnEfficiency<< " for layer = "<<layerIndex <<"\n";
          // This should never happen, but only check if it is not an upgrade geometry
          if (NumberOfBarrelLayers==3){
        if(numColumns>416)  LogWarning ("Pixel Geometry") <<" wrong columns in barrel "<<numColumns;
        if(numRows>160)  LogWarning ("Pixel Geometry") <<" wrong rows in barrel "<<numRows;
        
        int ladder=tTopo->pxbLadder(detID);
        int module=tTopo->pxbModule(detID);
        if (module<=4) module=5-module;
        else module-=4;
        
        columnEfficiency *= pixelEff_.theLadderEfficiency_BPix[layerIndex-1][ladder-1]*pixelEff_.theModuleEfficiency_BPix[layerIndex-1][module-1]*pixelEff_.pu_scale[layerIndex-1];
          }
        } else if(pixdet->subDetector()==GeomDetEnumerators::SubDetector::PixelEndcap ||
              pixdet->subDetector()==GeomDetEnumerators::SubDetector::P1PXEC ||
              pixdet->subDetector()==GeomDetEnumerators::SubDetector::P2PXEC){                // forward disks
    
          unsigned int diskIndex=tTopo->layer(detID)+pixelEff_.FPixIndex; // Use diskIndex-1 later to stay consistent with BPix
          unsigned int panelIndex=tTopo->pxfPanel(detID);
          unsigned int moduleIndex=tTopo->pxfModule(detID);
          //if (pixelEff_.FPixIndex>diskIndex-1){throw cms::Exception("Configuration") <<"SiPixelDigitizer is using the wrong efficiency value. index = "
          //                                                                       <<diskIndex-1<<" , MinIndex = "<<pixelEff_.FPixIndex<<" ... "<<tTopo->pxfDisk(detID);}
          pixelEfficiency  = pixelEff_.thePixelEfficiency[diskIndex-1];
          columnEfficiency = pixelEff_.thePixelColEfficiency[diskIndex-1];
          chipEfficiency   = pixelEff_.thePixelChipEfficiency[diskIndex-1];
          //std::cout <<"Using FPix columnEfficiency = "<<columnEfficiency<<" for Disk = "<< tTopo->pxfDisk(detID)<<"\n";
          // Sometimes the forward pixels have wrong size,
          // this crashes the index conversion, so exit, but only check if it is not an upgrade geometry
          if (NumberOfBarrelLayers==3){  // whether it is the present or the phase 1 detector can be checked using GeomDetEnumerators::SubDetector
        if(numColumns>260 || numRows>160) {
          if(numColumns>260)  LogWarning ("Pixel Geometry") <<" wrong columns in endcaps "<<numColumns;
          if(numRows>160)  LogWarning ("Pixel Geometry") <<" wrong rows in endcaps "<<numRows;
          return;
        }
        if ((panelIndex==1 && (moduleIndex==1 || moduleIndex==2)) || (panelIndex==2 && moduleIndex==1)) { //inner modules
          columnEfficiency*=pixelEff_.theInnerEfficiency_FPix[diskIndex-1]*pixelEff_.pu_scale[3];
        } else { //outer modules
          columnEfficiency*=pixelEff_.theOuterEfficiency_FPix[diskIndex-1]*pixelEff_.pu_scale[4];
        }
          } // current detector, forward
        } else if(pixdet->subDetector()==GeomDetEnumerators::SubDetector::P2OTB ||pixdet->subDetector()==GeomDetEnumerators::SubDetector::P2OTEC) {
          // If phase 2 outer tracker, hardcoded values as they have been so far
          pixelEfficiency  = 0.999;
          columnEfficiency = 0.999;
          chipEfficiency   = 0.999;
        } // if barrel/forward
      } else { // Load precomputed factors from Database
        pixelEfficiency  = pixelEff_.PixelGeomFactors.at(detID);
        columnEfficiency = pixelEff_.ColGeomFactors.at(detID)*pixelEff_.pu_scale[pixelEff_.iPU.at(detID)];
        chipEfficiency   = pixelEff_.ChipGeomFactors.at(detID);
      }
  
#ifdef TP_DEBUG
      LogDebug ("Pixel Digitizer") << " enter pixel_inefficiency " << pixelEfficiency << " "
                       << columnEfficiency << " " << chipEfficiency;
#endif
  
      // Initilize the index converter
      //PixelIndices indexConverter(numColumns,numRows);
      std::auto_ptr<PixelIndices> pIndexConverter(new PixelIndices(numColumns,numRows));


      int chipIndex = 0;
      int rowROC = 0;
      int colROC = 0;
      std::map<int, int, std::less<int> >chips, columns;
      std::map<int, int, std::less<int> >::iterator iter;
  
      // Find out the number of columns and rocs hits
      // Loop over hit pixels, amplitude in electrons, channel = coded row,col
      for (signal_map_const_iterator i = theSignal.begin(); i != theSignal.end(); ++i) {
    
        int chan = i->first;
        std::pair<int,int> ip = PixelDigi::channelToPixel(chan);
        int row = ip.first;  // X in row
        int col = ip.second; // Y is in col
        //transform to ROC index coordinates
        pIndexConverter->transformToROC(col,row,chipIndex,colROC,rowROC);
        int dColInChip = pIndexConverter->DColumn(colROC); // get ROC dcol from ROC col
        //dcol in mod
        int dColInDet = pIndexConverter->DColumnInModule(dColInChip,chipIndex);
    
        chips[chipIndex]++;
        columns[dColInDet]++;
      }
  
      // Delete some ROC hits.
      for ( iter = chips.begin(); iter != chips.end() ; iter++ ) {
        //float rand  = RandFlat::shoot();
        float rand  = CLHEP::RandFlat::shoot(engine);
        if( rand > chipEfficiency ) chips[iter->first]=0;
      }
  
      // Delete some Dcol hits.
      for ( iter = columns.begin(); iter != columns.end() ; iter++ ) {
        //float rand  = RandFlat::shoot();
        float rand  = CLHEP::RandFlat::shoot(engine);
        if( rand > columnEfficiency ) columns[iter->first]=0;
      }
  
      // Now loop again over pixels to kill some of them.
      // Loop over hit pixels, amplitude in electrons, channel = coded row,col
      for(signal_map_iterator i = theSignal.begin();i != theSignal.end(); ++i) {
    
        //    int chan = i->first;
        std::pair<int,int> ip = PixelDigi::channelToPixel(i->first);//get pixel pos
        int row = ip.first;  // X in row
        int col = ip.second; // Y is in col
        //transform to ROC index coordinates
        pIndexConverter->transformToROC(col,row,chipIndex,colROC,rowROC);
        int dColInChip = pIndexConverter->DColumn(colROC); //get ROC dcol from ROC col
        //dcol in mod
        int dColInDet = pIndexConverter->DColumnInModule(dColInChip,chipIndex);
    
        //float rand  = RandFlat::shoot();
        float rand  = CLHEP::RandFlat::shoot(engine);
        if( chips[chipIndex]==0 || columns[dColInDet]==0
        || rand>pixelEfficiency ) {
          // make pixel amplitude =0, pixel will be lost at clusterization
          i->second=(0.); // reset amplitude
        } // end if
        //Make a new Digi:

        SPD.push_back( PixelDigi(i->first, i->second) );     

      } // end pixel loop
      // push back vector here of one detID
      
      vPixelDigi.push_back(SPD);
    }
      }
    }// end of loop over detectors

    // make new digi collection
    
    std::auto_ptr< edm::DetSetVector<PixelDigi> > MyPixelDigis(new edm::DetSetVector<PixelDigi>(vPixelDigi) );

    // put collection

    e.put( MyPixelDigis, PixelDigiCollectionDM_ );

    // clear local storage for this event
    SiHitStorage_.clear();
  }

void DataMixingSiPixelMCDigiWorker::setPileupInfo(const std::vector<PileupSummaryInfo> &ps, const int &bunchSpacing) {

  //double bunchScale=1.0;
  //if (bunchSpacing==25) bunchScale=bunchScaleAt25;
  
  int p = -1;
  for ( unsigned int i=0; i<ps.size(); i++) 
    if ( ps[i].getBunchCrossing() == 0 ) 
      p=i;

  if ( p>=0 ) {
    for (size_t i=0, n = pixelEff_.thePUEfficiency.size(); i<n; i++) {
      double instlumi = ps[p].getTrueNumInteractions()*pixelEff_.theInstLumiScaleFactor;
      double instlumi_pow=1.;
      pixelEff_.pu_scale[i] = 0;
      for  (size_t j=0; j<pixelEff_.thePUEfficiency[i].size(); j++){
    pixelEff_.pu_scale[i]+=instlumi_pow*pixelEff_.thePUEfficiency[i][j];
    instlumi_pow*=instlumi;
      }
    }
  }

} //this sets pu_scale

} //edm