AlignmentIO Class Reference

#include <AlignmentIO.h>

Inheritance diagram for AlignmentIO:

List of all members.

Public Member Functions
virtual AlignablePositions	readAlignableAbsolutePositions (const align::Alignables &alivec, const char *filename, int iter, int &ierr)=0
	read Alignable current absolute positions
virtual AlignablePositions	readAlignableOriginalPositions (const align::Alignables &alivec, const char *filename, int iter, int &ierr)=0
	read Alignable original (before misalignment) absolute positions
virtual AlignableShifts	readAlignableRelativePositions (const align::Alignables &alivec, const char *filename, int iter, int &ierr)=0
	read Alignable relative positions (shift,rotation)
virtual align::Parameters	readAlignmentParameters (const align::Alignables &alivec, const char *filename, int iter, int &ierr)=0
	read AlignmentParameters
virtual align::Correlations	readCorrelations (const align::Alignables &alivec, const char *filename, int iter, int &ierr)=0
	read Correlations
virtual void	writeAlignableAbsolutePositions (const align::Alignables &alivec, const char *filename, int iter, bool validCheck, int &ierr)=0
	write Alignable current absolute positions
virtual void	writeAlignableOriginalPositions (const align::Alignables &alivec, const char *filename, int iter, bool validCheck, int &ierr)=0
	write Alignable original (before misalignment) absolute positions
virtual void	writeAlignableRelativePositions (const align::Alignables &alivec, const char *filename, int iter, bool validCheck, int &ierr)=0
	write Alignable relative positions (shift,rotation)
virtual void	writeAlignmentParameters (const align::Alignables &alivec, const char *filename, int iter, bool validCheck, int &ierr)=0
	write AlignmentParameters
virtual void	writeCorrelations (const align::Correlations &cormap, const char *filename, int iter, bool validCheck, int &ierr)=0
	write Correlations
virtual void	writeOrigRigidBodyAlignmentParameters (const align::Alignables &alivec, const char *filename, int iter, bool validCheck, int &ierr)=0
	write RigidBodyAlignmentParameters as applied on top of original positions

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Detailed Description

Abstract base class for input/output of Alignment parameters, Correlations, as well as absolute and relative coordinates of Alignables

Date:

2007/10/08 14:38:15

Revision:

1.4

(last update by

Author:

cklae

)

Definition at line 19 of file AlignmentIO.h.

---

Member Function Documentation

virtual AlignablePositions AlignmentIO::readAlignableAbsolutePositions	(	const align::Alignables &	alivec,
		const char *	filename,
		int	iter,
		int &	ierr
	)		[pure virtual]

read Alignable current absolute positions

Implemented in AlignmentIORoot.

virtual AlignablePositions AlignmentIO::readAlignableOriginalPositions	(	const align::Alignables &	alivec,
		const char *	filename,
		int	iter,
		int &	ierr
	)		[pure virtual]

read Alignable original (before misalignment) absolute positions

Implemented in AlignmentIORoot.

virtual AlignableShifts AlignmentIO::readAlignableRelativePositions	(	const align::Alignables &	alivec,
		const char *	filename,
		int	iter,
		int &	ierr
	)		[pure virtual]

read Alignable relative positions (shift,rotation)

Implemented in AlignmentIORoot.

virtual align::Parameters AlignmentIO::readAlignmentParameters	(	const align::Alignables &	alivec,
		const char *	filename,
		int	iter,
		int &	ierr
	)		[pure virtual]

read AlignmentParameters

Implemented in AlignmentIORoot.

virtual align::Correlations AlignmentIO::readCorrelations	(	const align::Alignables &	alivec,
		const char *	filename,
		int	iter,
		int &	ierr
	)		[pure virtual]

read Correlations

Implemented in AlignmentIORoot.

virtual void AlignmentIO::writeAlignableAbsolutePositions	(	const align::Alignables &	alivec,
		const char *	filename,
		int	iter,
		bool	validCheck,
		int &	ierr
	)		[pure virtual]

write Alignable current absolute positions

Implemented in AlignmentIORoot.

virtual void AlignmentIO::writeAlignableOriginalPositions	(	const align::Alignables &	alivec,
		const char *	filename,
		int	iter,
		bool	validCheck,
		int &	ierr
	)		[pure virtual]

write Alignable original (before misalignment) absolute positions

Implemented in AlignmentIORoot.

virtual void AlignmentIO::writeAlignableRelativePositions	(	const align::Alignables &	alivec,
		const char *	filename,
		int	iter,
		bool	validCheck,
		int &	ierr
	)		[pure virtual]

write Alignable relative positions (shift,rotation)

Implemented in AlignmentIORoot.

virtual void AlignmentIO::writeAlignmentParameters	(	const align::Alignables &	alivec,
		const char *	filename,
		int	iter,
		bool	validCheck,
		int &	ierr
	)		[pure virtual]

write AlignmentParameters

Implemented in AlignmentIORoot.

virtual void AlignmentIO::writeCorrelations	(	const align::Correlations &	cormap,
		const char *	filename,
		int	iter,
		bool	validCheck,
		int &	ierr
	)		[pure virtual]

write Correlations

Implemented in AlignmentIORoot.

virtual void AlignmentIO::writeOrigRigidBodyAlignmentParameters	(	const align::Alignables &	alivec,
		const char *	filename,
		int	iter,
		bool	validCheck,
		int &	ierr
	)		[pure virtual]

write RigidBodyAlignmentParameters as applied on top of original positions

Implemented in AlignmentIORoot.