Public Member Functions | |
def | __init__ |
def | createConfiguration |
def | createScript |
def | getRepMap |
Public Member Functions inherited from validateAlignments.GenericValidation | |
def | __init__ |
def | createConfiguration |
def | createFiles |
def | createScript |
def | getCompareStrings |
def | getRepMap |
Public Attributes | |
copyImages | |
randomWorkdirPart | |
referenceAlignment | |
Public Attributes inherited from validateAlignments.GenericValidation | |
alignmentToValidate | |
configFiles | |
filesToCompare | |
randomWorkdirPart | |
scriptFiles | |
Private Attributes | |
__compares | |
Additional Inherited Members | |
Static Public Attributes inherited from validateAlignments.GenericValidation | |
string | defaultReferenceName = "DEFAULT" |
object representing a geometry comparison job alignemnt is the alignment to analyse config is the overall configuration copyImages indicates wether plot*.eps files should be copied back from the farm
Definition at line 263 of file validateAlignments.py.
def validateAlignments.GeometryComparision.__init__ | ( | self, | |
alignment, | |||
referenceAlignment, | |||
config, | |||
copyImages = True , |
|||
randomWorkdirPart = None |
|||
) |
Definition at line 270 of file validateAlignments.py.
def validateAlignments.GeometryComparision.createConfiguration | ( | self, | |
path | |||
) |
Definition at line 307 of file validateAlignments.py.
References validateAlignments.GeometryComparision.__compares, validateAlignments.Alignment.getRepMap(), validateAlignments.GenericValidation.getRepMap(), validateAlignments.GenericValidation.randomWorkdirPart, validateAlignments.GeometryComparision.referenceAlignment, validateAlignments.replaceByMap(), and split.
def validateAlignments.GeometryComparision.createScript | ( | self, | |
path | |||
) |
Definition at line 333 of file validateAlignments.py.
References validateAlignments.GeometryComparision.__compares, validateAlignments.GenericValidation.configFiles, validateAlignments.GeometryComparision.copyImages, validateAlignments.GenericValidation.filesToCompare, validateAlignments.Alignment.getRepMap(), validateAlignments.GenericValidation.getRepMap(), validateAlignments.replaceByMap(), and split.
def validateAlignments.GeometryComparision.getRepMap | ( | self, | |
alignment = None |
|||
) |
Definition at line 289 of file validateAlignments.py.
References validateAlignments.GenericValidation.alignmentToValidate, and validateAlignments.GeometryComparision.referenceAlignment.
|
private |
Definition at line 275 of file validateAlignments.py.
Referenced by validateAlignments.GeometryComparision.createConfiguration(), and validateAlignments.GeometryComparision.createScript().
validateAlignments.GeometryComparision.copyImages |
Definition at line 287 of file validateAlignments.py.
Referenced by validateAlignments.GeometryComparision.createScript().
validateAlignments.GeometryComparision.randomWorkdirPart |
Definition at line 273 of file validateAlignments.py.
validateAlignments.GeometryComparision.referenceAlignment |
Definition at line 274 of file validateAlignments.py.
Referenced by validateAlignments.GeometryComparision.createConfiguration(), and validateAlignments.GeometryComparision.getRepMap().