dqmPostProcessing_online.py

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#! /usr/bin/env python3

from __future__ import print_function
import os, time, sys, shutil, glob, smtplib, re
from datetime import datetime
from email.MIMEText import MIMEText
#from ROOT import TFile
sys.stdout = os.fdopen(sys.stdout.fileno(), 'w', 0)

DIR = '/data/dqm/dropbox'  # directory to search new files
DB = '/home/dqm/dqm.db' #master db
TMPDB = '/home/dqm/dqm.db.tmp' # temporal db
FILEDIR = '/data/dqm/merged' # directory, to which merged file is stored
DONEDIR = '/data/dqm/done' # directory, to which processed files are stored
WAITTIME = 120 # waiting time for new files (sec)
MAX_TOTAL_RUNS = 400
MAX_RUNS = 10

YourMail = "lilopera@cern.ch"
ServerMail = "dqm@srv-C2D05-19.cms"

def sendmail(EmailAddress,run):
    s=smtplib.SMTP("localhost")
    tolist=[EmailAddress, "lat@cern.ch"]
    body="File merge failed by unknown reason for run"+run
    msg = MIMEText(body)
    msg['Subject'] = "File merge failed."
    msg['From'] = ServerMail
    msg['To'] = EmailAddress
    s.sendmail(ServerMail,tolist,msg.as_string())
    s.quit()

def filecheck(rootfile):
    f = TFile(rootfile)
    if (f.IsZombie()):
        #print "File corrupted"
        f.Close()
        return 0
    else:
        hist = f.FindObjectAny("reportSummaryContents")
        #(skip filecheck for HcalTiming files!!)
        if (hist == None and rootfile.rfind('HcalTiming') == -1):
            #print "File is incomplete"
            f.Close()
            return 0
        else:
            #print "File is OK"
            f.Close()
            return 1

while True:
    #### search new files
    NRUNS = 0
    NFOUND = 0
    NEW = {}
    for dir, subdirs, files in os.walk(DIR):
        for f in files:
            if not f.startswith("DQM_Reference") and re.match(r'^DQM_.*_R[0-9]{9}\.root$', f):
                runnr = f[-14:-5]
                donefile = "%s/%s/%s/%s" % (DONEDIR, runnr[0:3], runnr[3:6], f)
                f = "%s/%s" % (dir, f)
                if os.path.exists(donefile) and os.stat(donefile).st_size == os.stat(f).st_size:
                    print("WARNING: %s was already processed but re-appeared" % f)
                    os.remove(f)
                    continue
                NEW.setdefault(runnr, []).append(f)
                NFOUND += 1

    if NFOUND:
        print('%s: found %d new files in %d runs.' % (datetime.now(), NFOUND, len(NEW)))

        newFiles = []
        allOldFiles = []
        for run in sorted(NEW.keys())[::-1]:
            NRUNS += 1
            if NRUNS > MAX_RUNS:
                break

            files = NEW[run]
            runnr = "%09d" % long(run)
            destdir = "%s/%s/%s" % (FILEDIR, runnr[0:3], runnr[3:6])
            donedir = "%s/%s/%s" % (DONEDIR, runnr[0:3], runnr[3:6])
            oldfiles = sorted(glob.glob("%s/DQM_V????_R%s.root" % (destdir, runnr)))[::-1]
            if len(oldfiles) > 0:
                version = int(oldfiles[0][-20:-16]) + 1
                files.append(oldfiles[0])
            else:
                version = 1

            if not os.path.exists(destdir):
                os.makedirs(destdir)
            if not os.path.exists(donedir):
                os.makedirs(donedir)

            destfile = "%s/DQM_V%04d_R%s.root" % (destdir, version, runnr)
            logfile = "%s.log" % destfile[:-5]
            tmpdestfile = "%s.tmp" % destfile

            print('Merging run %s to %s (adding %s to %s)' % (run, destfile, files, oldfiles))
            LOGFILE = open(logfile, 'a')
            LOGFILE.write(os.popen('DQMMergeFile %s %s' % (tmpdestfile, " ".join(files))).read())
            LOGFILE.close()
            if not os.path.exists(tmpdestfile):
                print('Failed merging files for run %s. Will try again later.' % run)
                sendmail(YourMail,run)
                continue

            os.rename(tmpdestfile, destfile)
            for f in files:
                os.rename(f, "%s/%s" % (donedir, f.rsplit('/', 1)[1]))

            allOldFiles.extend(oldfiles)
            newFiles.append((long(run), destfile))

        if os.path.exists(TMPDB):
            os.remove(TMPDB)

        if os.path.exists(DB):
            os.rename(DB, TMPDB)
        else:
            os.system('set -x; visDQMRegisterFile %s "/Global/Online/ALL" "Global run"' % TMPDB)

        if len(allOldFiles) > 0:
            os.system('set -x; visDQMUnregisterFile %s %s' % (TMPDB, " ".join(allOldFiles)))

        existing = [long(x) for x in os.popen("sqlite3 %s 'select distinct runnr from t_data'" % TMPDB).read().split()]
        for runnr, file in newFiles:
            print('Registering %s for run %d' % (file, runnr))
            older = sorted([x for x in existing if x < runnr])
            newer = sorted([x for x in existing if x > runnr])
            if len(newer) > MAX_TOTAL_RUNS:
                print("Too many newer runs (%d), not registering %s for run %d" % (len(newer), file, runnr))
                continue

            if len(older) > MAX_TOTAL_RUNS:
                print("Too many older runs (%d), pruning data for oldest run %d" % (len(older), older[0]))
                os.system(r"set -x; sqlite3 %s 'delete from t_data where runnr = %d'" % (TMPDB, older[0]))
                os.system(r"set -x; sqlite3 %s 'delete from t_files where name like '\''%%R%09d.root'\'" % (TMPDB, older[0]))
                os.system(r"set -x; sqlite3 %s 'vacuum'" % TMPDB)
                existing.remove(older[0])

            os.system('set -x; visDQMRegisterFile %s "/Global/Online/ALL" "Global run" %s' % (TMPDB, file))
            existing.append(runnr)

        os.rename(TMPDB, DB)

    if NRUNS <= MAX_RUNS:
        time.sleep(WAITTIME)