StreamSerializer.cc

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#include "IOPool/Streamer/interface/StreamSerializer.h"
#include "DataFormats/Provenance/interface/BranchDescription.h"
#include "DataFormats/Provenance/interface/ParentageRegistry.h"
#include "DataFormats/Provenance/interface/Parentage.h"
#include "DataFormats/Provenance/interface/ProductProvenance.h"
#include "DataFormats/Provenance/interface/SelectedProducts.h"
#include "DataFormats/Provenance/interface/EventSelectionID.h"
#include "DataFormats/Provenance/interface/BranchListIndex.h"
#include "IOPool/Streamer/interface/ClassFiller.h"
#include "IOPool/Streamer/interface/InitMsgBuilder.h"
#include "FWCore/Framework/interface/ConstProductRegistry.h"
#include "FWCore/Framework/interface/EventForOutput.h"
#include "FWCore/ParameterSet/interface/Registry.h"
#include "FWCore/Utilities/interface/Adler32Calculator.h"
#include "DataFormats/Streamer/interface/StreamedProducts.h"
#include "FWCore/ServiceRegistry/interface/Service.h"
#include "FWCore/MessageLogger/interface/MessageLogger.h"
 
#include "zlib.h"
#include "lzma.h"
#include "zstd.h"
#include <algorithm>
#include <cstdlib>
#include <iostream>
#include <vector>
 
namespace edm {
 
  StreamSerializer::StreamSerializer(SelectedProducts const *selections)
      : selections_(selections), tc_(getTClass(typeid(SendEvent))) {}
 
  int StreamSerializer::serializeRegistry(SerializeDataBuffer &data_buffer,
                                          const BranchIDLists &branchIDLists,
                                          ThinnedAssociationsHelper const &thinnedAssociationsHelper) {
    SendJobHeader::ParameterSetMap psetMap;
    pset::Registry::instance()->fillMap(psetMap);
    return serializeRegistry(data_buffer, branchIDLists, thinnedAssociationsHelper, psetMap);
  }
 
  int StreamSerializer::serializeRegistry(SerializeDataBuffer &data_buffer,
                                          const BranchIDLists &branchIDLists,
                                          ThinnedAssociationsHelper const &thinnedAssociationsHelper,
                                          SendJobHeader::ParameterSetMap const &psetMap) {
    FDEBUG(6) << "StreamSerializer::serializeRegistry" << std::endl;
    SendJobHeader sd;
 
    FDEBUG(9) << "Product List: " << std::endl;
 
    for (auto const &selection : *selections_) {
      sd.push_back(*selection.first);
      FDEBUG(9) << "StreamOutput got product = " << selection.first->className() << std::endl;
    }
    Service<ConstProductRegistry> reg;
    sd.setBranchIDLists(branchIDLists);
    sd.setThinnedAssociationsHelper(thinnedAssociationsHelper);
    sd.setParameterSetMap(psetMap);
 
    data_buffer.rootbuf_.Reset();
 
    RootDebug tracer(10, 10);
 
    TClass *tc = getTClass(typeid(SendJobHeader));
    int bres = data_buffer.rootbuf_.WriteObjectAny((char *)&sd, tc);
 
    switch (bres) {
      case 0:  // failure
      {
        throw cms::Exception("StreamTranslation", "Registry serialization failed")
            << "StreamSerializer failed to serialize registry\n";
        break;
      }
      case 1:  // succcess
        break;
      case 2:  // truncated result
      {
        throw cms::Exception("StreamTranslation", "Registry serialization truncated")
            << "StreamSerializer module attempted to serialize\n"
            << "a registry that is to big for the allocated buffers\n";
        break;
      }
      default:  // unknown
      {
        throw cms::Exception("StreamTranslation", "Registry serialization failed")
            << "StreamSerializer module got an unknown error code\n"
            << " while attempting to serialize registry\n";
        break;
      }
    }
 
    data_buffer.curr_event_size_ = data_buffer.rootbuf_.Length();
    data_buffer.curr_space_used_ = data_buffer.curr_event_size_;
    data_buffer.ptr_ = (unsigned char *)data_buffer.rootbuf_.Buffer();
    // calculate the adler32 checksum and fill it into the struct
    data_buffer.adler32_chksum_ = cms::Adler32((char *)data_buffer.bufferPointer(), data_buffer.curr_space_used_);
    //std::cout << "Adler32 checksum of init message = " << data_buffer.adler32_chksum_ << std::endl;
    return data_buffer.curr_space_used_;
  }
 
  int StreamSerializer::serializeEvent(SerializeDataBuffer &data_buffer,
                                       EventForOutput const &event,
                                       ParameterSetID const &selectorConfig,
                                       StreamerCompressionAlgo compressionAlgo,
                                       int compression_level,
                                       unsigned int reserveSize) const {
    EventSelectionIDVector selectionIDs = event.eventSelectionIDs();
    selectionIDs.push_back(selectorConfig);
    SendEvent se(event.eventAuxiliary(), event.processHistory(), selectionIDs, event.branchListIndexes());
 
    // Loop over EDProducts, fill the provenance, and write.
 
    // Historical note. I fixed two bugs in the code below in
    // March 2017. One would have caused any Parentage written
    // using the Streamer output module to be total nonsense
    // prior to the fix. The other would have caused seg faults
    // when the Parentage was dropped in an earlier process.
 
    // FIX ME. The code below stores the direct parentage of
    // kept products, but it does not save the parentage of
    // dropped objects that are ancestors of kept products like
    // the PoolOutputModule. That information is currently
    // lost when the streamer output module is used.
 
    for (auto const &selection : *selections_) {
      BranchDescription const &desc = *selection.first;
      BasicHandle result = event.getByToken(selection.second, desc.unwrappedTypeID());
      if (!result.isValid()) {
        // No product with this ID was put in the event.
        // Create and write the provenance.
        se.products().push_back(StreamedProduct(desc));
      } else {
        if (result.provenance()->productProvenance()) {
          Parentage const *parentage =
              ParentageRegistry::instance()->getMapped(result.provenance()->productProvenance()->parentageID());
          assert(parentage);
          se.products().push_back(
              StreamedProduct(result.wrapper(), desc, result.wrapper() != nullptr, &parentage->parents()));
        } else {
          se.products().push_back(StreamedProduct(result.wrapper(), desc, result.wrapper() != nullptr, nullptr));
        }
      }
    }
 
    data_buffer.rootbuf_.Reset();
    RootDebug tracer(10, 10);
 
    //TClass* tc = getTClass(typeid(SendEvent));
    int bres = data_buffer.rootbuf_.WriteObjectAny(&se, tc_);
    switch (bres) {
      case 0:  // failure
      {
        throw cms::Exception("StreamTranslation", "Event serialization failed")
            << "StreamSerializer failed to serialize event: " << event.id();
        break;
      }
      case 1:  // succcess
        break;
      case 2:  // truncated result
      {
        throw cms::Exception("StreamTranslation", "Event serialization truncated")
            << "StreamSerializer module attempted to serialize an event\n"
            << "that is to big for the allocated buffers: " << event.id();
        break;
      }
      default:  // unknown
      {
        throw cms::Exception("StreamTranslation", "Event serialization failed")
            << "StreamSerializer module got an unknown error code\n"
            << " while attempting to serialize event: " << event.id();
        break;
      }
    }
 
    data_buffer.curr_event_size_ = data_buffer.rootbuf_.Length();
    data_buffer.ptr_ = (unsigned char *)data_buffer.rootbuf_.Buffer();
 
#if 0
   if(data_buffer.ptr_ != data_.ptr_) {
        std::cerr << "ROOT reset the buffer!!!!\n";
        data_.ptr_ = data_buffer.ptr_; // ROOT may have reset our data pointer!!!!
        }
#endif
    // std::copy(rootbuf_.Buffer(),rootbuf_.Buffer()+rootbuf_.Length(),
    // eventMessage.eventAddr());
    // eventMessage.setEventLength(rootbuf.Length());
 
    // compress before return if we need to
    // should test if compressed already - should never be?
    //   as double compression can have problems
    unsigned int dest_size = 0;
    switch (compressionAlgo) {
      case ZLIB:
        dest_size = compressBuffer((unsigned char *)data_buffer.rootbuf_.Buffer(),
                                   data_buffer.curr_event_size_,
                                   data_buffer.comp_buf_,
                                   compression_level,
                                   reserveSize);
        break;
      case LZMA:
        dest_size = compressBufferLZMA((unsigned char *)data_buffer.rootbuf_.Buffer(),
                                       data_buffer.curr_event_size_,
                                       data_buffer.comp_buf_,
                                       compression_level,
                                       reserveSize);
        break;
      case ZSTD:
        dest_size = compressBufferZSTD((unsigned char *)data_buffer.rootbuf_.Buffer(),
                                       data_buffer.curr_event_size_,
                                       data_buffer.comp_buf_,
                                       compression_level,
                                       reserveSize);
        break;
      default:
        dest_size = data_buffer.rootbuf_.Length();
        if (data_buffer.comp_buf_.size() < dest_size + reserveSize)
          data_buffer.comp_buf_.resize(dest_size + reserveSize);
        std::copy((char *)data_buffer.rootbuf_.Buffer(),
                  (char *)data_buffer.rootbuf_.Buffer() + dest_size,
                  (char *)(&data_buffer.comp_buf_[SerializeDataBuffer::reserve_size]));
        break;
    };
 
    data_buffer.ptr_ = &data_buffer.comp_buf_[reserveSize];  // reset to point at compressed area
    data_buffer.curr_space_used_ = dest_size;
 
    // calculate the adler32 checksum and fill it into the struct
    data_buffer.adler32_chksum_ = cms::Adler32((char *)data_buffer.bufferPointer(), data_buffer.curr_space_used_);
    //std::cout << "Adler32 checksum of event = " << data_buffer.adler32_chksum_ << std::endl;
 
    return data_buffer.curr_space_used_;
  }
 
  unsigned int StreamSerializer::compressBuffer(unsigned char *inputBuffer,
                                                unsigned int inputSize,
                                                std::vector<unsigned char> &outputBuffer,
                                                int compressionLevel,
                                                unsigned int reserveSize) {
    unsigned int resultSize = 0;
 
    // what are these magic numbers? (jbk) -> LSB 3.0 buffer size reccommendation
    unsigned long dest_size = (unsigned long)(double(inputSize) * 1.002 + 1.0) + 12;
    //this can has some overhead in memory usage (capacity > size) due to the way std::vector allocator works
    if (outputBuffer.size() < dest_size + reserveSize)
      outputBuffer.resize(dest_size + reserveSize);
 
    // compression 1-9, 6 is zlib default, 0 none
    int ret = compress2(&outputBuffer[reserveSize], &dest_size, inputBuffer, inputSize, compressionLevel);
 
    // check status
    if (ret == Z_OK) {
      // return the correct length
      resultSize = dest_size;
 
      FDEBUG(1) << " original size = " << inputSize << " final size = " << dest_size
                << " ratio = " << double(dest_size) / double(inputSize) << std::endl;
    } else {
      throw cms::Exception("StreamSerializer", "compressBuffer")
          << "Compression Return value: " << ret << " Okay = " << Z_OK << std::endl;
    }
 
    return resultSize;
  }
 
  //this is based on ROOT R__zipLZMA
  unsigned int StreamSerializer::compressBufferLZMA(unsigned char *inputBuffer,
                                                    unsigned int inputSize,
                                                    std::vector<unsigned char> &outputBuffer,
                                                    int compressionLevel,
                                                    unsigned int reserveSize,
                                                    bool addHeader) {
    // what are these magic numbers? (jbk)
    unsigned int hdr_size = addHeader ? 4 : 0;
    unsigned long dest_size = (unsigned long)(double(inputSize) * 1.01 + 1.0) + 12;
    if (outputBuffer.size() < dest_size + reserveSize)
      outputBuffer.resize(dest_size + reserveSize);
 
    // compression 1-9
    uint32_t dict_size_est = inputSize / 4;
    lzma_stream stream = LZMA_STREAM_INIT;
    lzma_options_lzma opt_lzma2;
    lzma_filter filters[] = {
        {.id = LZMA_FILTER_LZMA2, .options = &opt_lzma2},
        {.id = LZMA_VLI_UNKNOWN, .options = nullptr},
    };
    lzma_ret returnStatus;
 
    unsigned char *tgt = &outputBuffer[reserveSize];
 
    //if (*srcsize > 0xffffff || *srcsize < 0) { //16 MB limit ?
    //   return;
    //}
 
    if (compressionLevel > 9)
      compressionLevel = 9;
 
    lzma_bool presetStatus = lzma_lzma_preset(&opt_lzma2, compressionLevel);
    if (presetStatus) {
      throw cms::Exception("StreamSerializer", "compressBufferLZMA") << "LZMA preset return status: " << presetStatus;
    }
 
    if (LZMA_DICT_SIZE_MIN > dict_size_est) {
      dict_size_est = LZMA_DICT_SIZE_MIN;
    }
    if (opt_lzma2.dict_size > dict_size_est) {
      /* reduce the dictionary size if larger than 1/4 the input size, preset
         dictionaries size can be expensively large
       */
      opt_lzma2.dict_size = dict_size_est;
    }
 
    returnStatus =
        lzma_stream_encoder(&stream,
                            filters,
                            LZMA_CHECK_NONE);  //CRC32 and CRC64 are available, but we already calculate adler32
    if (returnStatus != LZMA_OK) {
      throw cms::Exception("StreamSerializer", "compressBufferLZMA")
          << "LZMA compression encoder return value: " << returnStatus;
    }
 
    stream.next_in = (const uint8_t *)inputBuffer;
    stream.avail_in = (size_t)(inputSize);
 
    stream.next_out = (uint8_t *)(&tgt[hdr_size]);
    stream.avail_out = (size_t)(dest_size - hdr_size);
 
    returnStatus = lzma_code(&stream, LZMA_FINISH);
 
    if (returnStatus != LZMA_STREAM_END) {
      lzma_end(&stream);
      throw cms::Exception("StreamSerializer", "compressBufferLZMA")
          << "LZMA compression return value: " << returnStatus;
    }
    lzma_end(&stream);
 
    //Add compression-specific header at the buffer start. This will be used to detect LZMA(2) format after streamer header
    if (addHeader) {
      tgt[0] = 'X'; /* Signature of LZMA from XZ Utils */
      tgt[1] = 'Z';
      tgt[2] = 0;
      tgt[3] = 0;  //let's put offset to 4, not 3
    }
 
    FDEBUG(1) << " LZMA original size = " << inputSize << " final size = " << stream.total_out
              << " ratio = " << double(stream.total_out) / double(inputSize) << std::endl;
 
    return stream.total_out + hdr_size;
  }
 
  unsigned int StreamSerializer::compressBufferZSTD(unsigned char *inputBuffer,
                                                    unsigned int inputSize,
                                                    std::vector<unsigned char> &outputBuffer,
                                                    int compressionLevel,
                                                    unsigned int reserveSize,
                                                    bool addHeader) {
    unsigned int hdr_size = addHeader ? 4 : 0;
    unsigned int resultSize = 0;
 
    // what are these magic numbers? (jbk) -> LSB 3.0 buffer size reccommendation
    size_t worst_size = ZSTD_compressBound(inputSize);
    //this can has some overhead in memory usage (capacity > size) due to the way std::vector allocator works
    if (outputBuffer.size() < worst_size + reserveSize + hdr_size)
      outputBuffer.resize(worst_size + reserveSize + hdr_size);
 
    //Add compression-specific header at the buffer start. This will be used to detect ZSTD format after streamer header
    unsigned char *tgt = &outputBuffer[reserveSize];
    if (addHeader) {
      tgt[0] = 'Z'; /* Pre */
      tgt[1] = 'S';
      tgt[2] = 0;
      tgt[3] = 0;
    }
 
    // compression 1-20
    size_t dest_size = ZSTD_compress(
        (void *)&outputBuffer[reserveSize + hdr_size], worst_size, (void *)inputBuffer, inputSize, compressionLevel);
 
    // check status
    if (!ZSTD_isError(dest_size)) {
      // return the correct length
      resultSize = (unsigned int)dest_size + hdr_size;
 
      FDEBUG(1) << " original size = " << inputSize << " final size = " << dest_size
                << " ratio = " << double(dest_size) / double(inputSize) << std::endl;
    } else {
      throw cms::Exception("StreamSerializer", "compressBuffer")
          << "Compression (ZSTD) Error: " << ZSTD_getErrorName(dest_size);
    }
 
    return resultSize;
  }
 
}  // namespace edm