mps_fire.py File Reference

Go to the source code of this file.

Namespaces
	mps_fire

Variables
string	mps_fire.backupCfgPath = Path+'/%s.bak'
string	mps_fire.backupScriptPath = Path+'/theScript.sh.bak'
string	mps_fire.cfgPath = Path+'/%s'
string	mps_fire.command = 'cat '
string	mps_fire.curJobName = 'm'
int	mps_fire.fireMerge = 0
int	mps_fire.forceMerge = 0
int	mps_fire.helpwanted = 0
	mps_fire.i = lib.nJobs
string	mps_fire.inCfgPath = theJobData+'/'
int	mps_fire.jobNumFrom1 = i+1
tuple	mps_fire.lib = mpslib.jobdatabase()
tuple	mps_fire.match = re.search('Job <(\d+)> is submitted', result)
int	mps_fire.maxJobs = 1
tuple	mps_fire.mergeCfg = subprocess.check_output(command, stderr=subprocess.STDOUT, shell=True)
int	mps_fire.mergeOK = 1
	mps_fire.nMerge = i-lib.nJobs
int	mps_fire.nSub = 0
string	mps_fire.Path = '%s/%s'
	mps_fire.queue = resources
tuple	mps_fire.resources = lib.get_class('mille')
	lib.JOBID[i] = '%07d' % int(match.group(1)) print 'jobid is',lib.JOBID[i] More...
tuple	mps_fire.result = subprocess.check_output(submission, stderr=subprocess.STDOUT, shell=True)
string	mps_fire.scriptPath = Path+'/theScript.sh'
string	mps_fire.submission = 'bsub -J %s %s %s/%s/theScript.sh'
string	mps_fire.theJobData = thePwd+'/jobData'
string	mps_fire.theJobName = 'mpalign'
tuple	mps_fire.thePwd = subprocess.check_output('pwd', stderr=subprocess.STDOUT, shell=True)