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/data/refman/pasoursint/CMSSW_5_3_3/src/RecoTracker/RoadSearchTrackCandidateMaker/src/RoadSearchTrackCandidateMakerAlgorithm.cc

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00001 //
00002 // Package:         RecoTracker/RoadSearchTrackCandidateMaker
00003 // Class:           RoadSearchTrackCandidateMakerAlgorithm
00004 // 
00005 // Description:     Converts cleaned clouds into
00006 //                  TrackCandidates using the 
00007 //                  TrajectoryBuilder framework
00008 //
00009 // Original Author: Oliver Gutsche, gutsche@fnal.gov
00010 // Created:         Wed Mar 15 13:00:00 UTC 2006
00011 //
00012 // $Author: innocent $
00013 // $Date: 2011/12/23 08:13:37 $
00014 // $Revision: 1.75 $
00015 //
00016 
00017 #include <vector>
00018 #include <iostream>
00019 #include <cmath>
00020 
00021 #include "RecoTracker/RoadSearchTrackCandidateMaker/interface/RoadSearchTrackCandidateMakerAlgorithm.h"
00022 
00023 #include "TrackingTools/RoadSearchHitAccess/interface/RoadSearchHitSorting.h"
00024 
00025 #include "DataFormats/RoadSearchCloud/interface/RoadSearchCloud.h"
00026 #include "DataFormats/TrackCandidate/interface/TrackCandidate.h"
00027 #include "DataFormats/Common/interface/OwnVector.h"
00028 
00029 #include "Geometry/CommonDetUnit/interface/TrackingGeometry.h"
00030 #include "Geometry/CommonDetUnit/interface/GeomDetUnit.h"
00031 #include "Geometry/TrackerGeometryBuilder/interface/TrackerGeometry.h"
00032 #include "Geometry/Records/interface/TrackerDigiGeometryRecord.h"
00033 
00034 #include "MagneticField/Engine/interface/MagneticField.h"
00035 #include "MagneticField/Records/interface/IdealMagneticFieldRecord.h" 
00036 
00037 #include "DataFormats/Common/interface/Handle.h"
00038 #include "FWCore/Framework/interface/ESHandle.h"
00039 #include "FWCore/Framework/interface/EventSetup.h"
00040 #include "FWCore/MessageLogger/interface/MessageLogger.h"
00041 
00042 #include "TrackingTools/GeomPropagators/interface/AnalyticalPropagator.h"
00043 #include "TrackingTools/TrajectoryState/interface/TrajectoryStateOnSurface.h"
00044 #include "TrackingTools/TrajectoryState/interface/TrajectoryStateTransform.h"
00045 #include "TrackingTools/TransientTrackingRecHit/interface/TransientTrackingRecHitBuilder.h" 
00046 #include "TrackingTools/Records/interface/TransientRecHitRecord.h" 
00047 
00048 #include "TrackingTools/PatternTools/interface/Trajectory.h"
00049 #include "TrackingTools/MaterialEffects/interface/PropagatorWithMaterial.h"
00050 #include "TrackingTools/KalmanUpdators/interface/KFUpdator.h"
00051 #include "TrackingTools/PatternTools/interface/TrajectoryStateUpdator.h"
00052 #include "TrackingTools/PatternTools/interface/MeasurementEstimator.h"
00053 #include "TrackingTools/KalmanUpdators/interface/Chi2MeasurementEstimatorBase.h"
00054 #include "TrackingTools/KalmanUpdators/interface/Chi2MeasurementEstimator.h"
00055 #include "TrackingTools/TransientTrackingRecHit/interface/TransientTrackingRecHitBuilder.h"
00056 #include "TrackingTools/PatternTools/interface/TrajectoryMeasurement.h"
00057 
00058 #include "TrackingTools/TrajectoryCleaning/interface/TrajectoryCleaner.h"
00059 #include "TrackingTools/TrajectoryCleaning/interface/TrajectoryCleanerBySharedHits.h"
00060 #include "RecoTracker/MeasurementDet/interface/MeasurementTracker.h"
00061 #include "RecoTracker/TkDetLayers/interface/GeometricSearchTracker.h"
00062 #include "RecoTracker/TkSeedGenerator/interface/FastHelix.h"
00063 #include "RecoTracker/TkSeedGenerator/interface/FastLine.h"
00064 #include "RecoTracker/RoadSearchSeedFinder/interface/RoadSearchSeedFinderAlgorithm.h"
00065 #include "TrackingTools/TrackFitters/interface/KFTrajectorySmoother.h"
00066 #include "RecoTracker/Record/interface/CkfComponentsRecord.h"
00067 #include "TrackingTools/TrajectoryState/interface/BasicSingleTrajectoryState.h"
00068 
00069 #include "TrackPropagation/SteppingHelixPropagator/interface/SteppingHelixPropagator.h"
00070 #include "RecoLocalTracker/SiStripRecHitConverter/interface/SiStripRecHitMatcher.h"
00071 #include "Geometry/TrackerGeometryBuilder/interface/GluedGeomDet.h"
00072 
00073 RoadSearchTrackCandidateMakerAlgorithm::RoadSearchTrackCandidateMakerAlgorithm(const edm::ParameterSet& conf) : conf_(conf) { 
00074   
00075   theNumHitCut = (unsigned int)conf_.getParameter<int>("NumHitCut");
00076   theChi2Cut   = conf_.getParameter<double>("HitChi2Cut");
00077   
00078   theEstimator = new Chi2MeasurementEstimator(theChi2Cut);
00079   theUpdator = new KFUpdator();
00080   theTrajectoryCleaner = new TrajectoryCleanerBySharedHits;
00081   
00082   CosmicReco_  = conf_.getParameter<bool>("StraightLineNoBeamSpotCloud");
00083   CosmicTrackMerging_ = conf_.getParameter<bool>("CosmicTrackMerging");
00084   MinChunkLength_ = conf_.getParameter<int>("MinimumChunkLength");
00085   nFoundMin_      = conf_.getParameter<int>("nFoundMin");
00086   
00087   initialVertexErrorXY_  = conf_.getParameter<double>("InitialVertexErrorXY");
00088   splitMatchedHits_  = conf_.getParameter<bool>("SplitMatchedHits");
00089   cosmicSeedPt_  = conf_.getParameter<double>("CosmicSeedPt");
00090 
00091   measurementTrackerName_ = conf_.getParameter<std::string>("MeasurementTrackerName");
00092   
00093   debug_ = false;
00094   debugCosmics_ = false;
00095 
00096   maxPropagationDistance = 1000.0; // 10m
00097 }
00098 
00099 RoadSearchTrackCandidateMakerAlgorithm::~RoadSearchTrackCandidateMakerAlgorithm() {
00100   delete theEstimator;
00101   delete theUpdator;
00102   delete theTrajectoryCleaner;
00103   // delete theMeasurementTracker;
00104 
00105 }
00106 
00107 void RoadSearchTrackCandidateMakerAlgorithm::run(const RoadSearchCloudCollection* input,
00108                                                  const edm::Event& e,
00109                                                  const edm::EventSetup& es,
00110                                                  TrackCandidateCollection &output)
00111 {
00112   
00113   //
00114   // right now, track candidates are just filled from cleaned
00115   // clouds. The trajectory of the seed is taken as the initial
00116   // trajectory for the final fit
00117   //
00118   
00119   //
00120   // get the transient builder
00121   //
00122   edm::ESHandle<TransientTrackingRecHitBuilder> theBuilder;
00123   std::string builderName = conf_.getParameter<std::string>("TTRHBuilder");   
00124   es.get<TransientRecHitRecord>().get(builderName,theBuilder);
00125   ttrhBuilder = theBuilder.product();
00126   
00127   edm::ESHandle<MeasurementTracker>    measurementTrackerHandle;
00128   es.get<CkfComponentsRecord>().get(measurementTrackerName_, measurementTrackerHandle);
00129   theMeasurementTracker = measurementTrackerHandle.product();
00130   
00131   std::vector<Trajectory> FinalTrajectories;
00132   
00133   
00134   // need this to sort recHits, sorting done after getting seed because propagationDirection is needed
00135   // get tracker geometry
00136   edm::ESHandle<TrackerGeometry> tracker;
00137   es.get<TrackerDigiGeometryRecord>().get(tracker);
00138   trackerGeom = tracker.product();
00139   
00140   edm::ESHandle<MagneticField> magField_;
00141   es.get<IdealMagneticFieldRecord>().get(magField_);
00142   magField = magField_.product();
00143   
00144   NoFieldCosmic_ = (CosmicReco_ && (magField->inTesla(GlobalPoint(0,0,0)).mag() < 0.01));
00145 
00146   theMeasurementTracker->update(e);
00147   //const MeasurementTracker*  theMeasurementTracker = new MeasurementTracker(es,mt_params); // will need this later
00148   
00149   theAloPropagator = new PropagatorWithMaterial(alongMomentum,.1057,&(*magField)); 
00150   theRevPropagator = new PropagatorWithMaterial(oppositeToMomentum,.1057,&(*magField)); 
00151   theAnalyticalPropagator = new AnalyticalPropagator(magField,anyDirection);
00152 
00153   thePropagator = theAloPropagator;
00154 
00155   //KFTrajectorySmoother theSmoother(*theRevPropagator, *theUpdator, *theEstimator);
00156   theSmoother = new KFTrajectorySmoother(*theRevPropagator, *theUpdator, *theEstimator);
00157   
00158   // get hit matcher
00159   theHitMatcher = new SiStripRecHitMatcher(3.0);
00160 
00161   //debug_ = true;
00162   //if (input->size()>0) debug_ = true;
00163 
00164   LogDebug("RoadSearch") << "Clean Clouds input size: " << input->size();
00165   if (debug_) std::cout << std::endl << std::endl
00166                         << "*** NEW EVENT: Clean Clouds input size: " << input->size() << std::endl;
00167   
00168   int i_c = 0;
00169   for ( RoadSearchCloudCollection::const_iterator cloud = input->begin(); cloud != input->end(); ++cloud ) {
00170     
00171     // fill rechits from cloud into new
00172     RoadSearchCloud::RecHitVector recHits = cloud->recHits();
00173     
00174     std::vector<Trajectory> CloudTrajectories;
00175     
00176     if (!CosmicReco_){
00177       std::sort(recHits.begin(),recHits.end(),SortHitPointersByGlobalPosition(tracker.product(),alongMomentum));
00178     }
00179     else {
00180       std::sort(recHits.begin(),recHits.end(),SortHitPointersByY(*tracker));
00181     }
00182 
00183     const unsigned int nlost_max = 2;
00184             
00185     // make a list of layers in cloud and mark stereo layers
00186     
00187     const unsigned int max_layers = 128;
00188 
00189     // collect hits in cloud by layer
00190     std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > > RecHitsByLayer;
00191     std::map<const DetLayer*, int> cloud_layer_reference; // for debugging
00192     std::map<const DetLayer*, int>::iterator hiter;
00193     for(RoadSearchCloud::RecHitVector::const_iterator ihit = recHits.begin();
00194         ihit != recHits.end(); ihit++) {
00195       // only use useful layers
00196       const DetLayer* thisLayer =
00197         theMeasurementTracker->geometricSearchTracker()->detLayer((*ihit)->geographicalId());
00198 
00199       std::map<const DetLayer*, int>::const_iterator ilyr = cloud_layer_reference.find(thisLayer);
00200       if (ilyr==cloud_layer_reference.end())
00201         cloud_layer_reference.insert(std::make_pair( thisLayer, RecHitsByLayer.size()));
00202 
00203       if (!RecHitsByLayer.empty() && RecHitsByLayer.back().first == thisLayer) { // Same as previous layer
00204         RecHitsByLayer.back().second.push_back(*ihit);
00205       }
00206       else { // check if this is a new layer
00207         if (ilyr != cloud_layer_reference.end()){// Not a New Layer
00208           int ilayer = ilyr->second;
00209           (RecHitsByLayer.begin()+ilayer)->second.push_back(*ihit);
00210         }
00211         else{// New Layer
00212           if (RecHitsByLayer.size() >= max_layers) break; // should never happen
00213           lstereo[RecHitsByLayer.size()] = false;
00214           if ((*ihit)->localPositionError().yy()<1.) lstereo[RecHitsByLayer.size()] = true;
00215           RoadSearchCloud::RecHitVector rhc;
00216           rhc.push_back(*ihit);
00217           RecHitsByLayer.push_back(std::make_pair(thisLayer, rhc));
00218         }       
00219       }
00220     }
00221 
00222     LogDebug("RoadSearch")<<"Cloud #"<<i_c<<" has "<<recHits.size()<<" hits in "<<RecHitsByLayer.size()<<" layers ";
00223     if (debug_) std::cout <<"Cloud "<<i_c<<" has "<<recHits.size()<<" hits in " <<RecHitsByLayer.size() << " layers " <<std::endl;;
00224     ++i_c;
00225 
00226     if (debug_){
00227       int ntothit = 0;
00228 
00229       for (std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > >::iterator ilhv = RecHitsByLayer.begin();
00230            ilhv != RecHitsByLayer.end(); ++ilhv) {
00231         std::cout<<"   Layer " << ilhv-RecHitsByLayer.begin() << " has " << ilhv->second.size() << " hits " << std::endl;
00232       }
00233       std::cout<<std::endl;
00234       for (std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > >::iterator ilhv = RecHitsByLayer.begin();
00235            ilhv != RecHitsByLayer.end(); ++ilhv) {
00236         RoadSearchCloud::RecHitVector theLayerHits = ilhv->second;
00237         for (RoadSearchCloud::RecHitVector::const_iterator ihit = theLayerHits.begin();
00238            ihit != theLayerHits.end(); ++ihit) {
00239         
00240           GlobalPoint gp = trackerGeom->idToDet((*ihit)->geographicalId())->surface().toGlobal((*ihit)->localPosition());
00241           if (CosmicReco_){
00242             std::cout << "   Hit "<< ntothit
00243                       << " x/y/z = "
00244                       << gp.x() << " " << gp.y() << " " << gp.z()
00245                       <<" in layer " << ilhv-RecHitsByLayer.begin()
00246                       << " is hit " << (ihit-theLayerHits.begin())+1 
00247                       << " of " << theLayerHits.size() << std::endl;
00248           }
00249           else {
00250             std::cout << "   Hit "<< ntothit
00251                       << " r/z = "
00252                       << gp.perp() << " " << gp.z()
00253                       <<" in layer " << ilhv-RecHitsByLayer.begin()
00254                       << " is hit " << (ihit-theLayerHits.begin())+1 
00255                       << " of " << theLayerHits.size() << std::endl;
00256           }
00257           ntothit++;
00258         }
00259       }
00260       std::cout<<std::endl;
00261     }
00262 
00263     // try to start from all layers until the chunk is too short
00264     //
00265     
00266     for (std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > >::iterator ilyr0 = RecHitsByLayer.begin();
00267          ilyr0 != RecHitsByLayer.end(); ++ilyr0) {
00268 
00269       unsigned int ilayer0 = (unsigned int)(ilyr0-RecHitsByLayer.begin());
00270       if (ilayer0 > RecHitsByLayer.size()-MinChunkLength_) continue;      
00271 
00272       std::vector<Trajectory> ChunkTrajectories;
00273       std::vector<Trajectory> CleanChunks;
00274       bool all_chunk_layers_used = false;
00275       
00276       if (debug_) std::cout  << "*** START NEW CHUNK --> layer range (" << ilyr0-RecHitsByLayer.begin() 
00277                              << "-" << RecHitsByLayer.size()-1 << ")";
00278 
00279       // collect hits from the starting layer
00280       RoadSearchCloud::RecHitVector recHits_start = ilyr0->second;
00281 
00282       //
00283       // Step 1: find small tracks (chunks) made of hits
00284       // in layers with low occupancy
00285       //
00286       
00287       // find layers with small number of hits
00288       // TODO: try to keep earliest layers + at least one stereo layer
00289       std::multimap<int, const DetLayer*> layer_map;
00290       std::map<const DetLayer*, int> layer_reference; // for debugging
00291                                                       // skip starting layer, as it is always included
00292       for (std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > >::iterator ilayer = ilyr0+1;
00293            ilayer != RecHitsByLayer.end(); ++ilayer) {
00294         layer_map.insert(std::make_pair(ilayer->second.size(), ilayer->first));
00295         layer_reference.insert(std::make_pair(ilayer->first, ilayer-RecHitsByLayer.begin()));
00296       }
00297       
00298       if (debug_) {
00299         std::cout<<std::endl<<"   Available layers are: " << std::endl;
00300         for (std::multimap<int, const DetLayer*>::iterator ilm1 = layer_map.begin();
00301              ilm1 != layer_map.end(); ++ilm1) {
00302           std::map<const DetLayer*, int>::iterator ilr = layer_reference.find(ilm1->second);
00303           if (ilr != layer_reference.end() && debug_) 
00304             std::cout << "Layer " << ilr->second << " with " << ilm1->first <<" hits" <<std::endl;;
00305         }
00306       }
00307 
00308       //const int max_middle_layers = 2;
00309       std::set<const DetLayer*> the_good_layers;
00310       std::vector<const DetLayer*> the_middle_layers;
00311       RoadSearchCloud::RecHitVector the_recHits_middle;
00312 
00313       //      bool StartLayers = 
00314       chooseStartingLayers(RecHitsByLayer,ilyr0,layer_map,the_good_layers,the_middle_layers,the_recHits_middle);
00315       if (debug_) {
00316         std::cout << " From new code... With " << the_good_layers.size() << " useful layers: ";
00317         for (std::set<const DetLayer*>::iterator igl = the_good_layers.begin();
00318              igl!= the_good_layers.end(); ++igl){
00319           std::map<const DetLayer*, int>::iterator ilr = layer_reference.find(*igl);
00320           if (ilr != layer_reference.end()) std::cout << " " << ilr->second;
00321         }
00322         std::cout << std::endl;
00323         std::cout << " From new code... and middle layers: ";
00324         for (std::vector<const DetLayer*>::iterator iml = the_middle_layers.begin();
00325              iml!= the_middle_layers.end(); ++iml){
00326           std::map<const DetLayer*, int>::iterator ilr = layer_reference.find(*iml);
00327           if (ilr != layer_reference.end()) std::cout << " " << ilr->second;
00328         }
00329         std::cout << std::endl;
00330       }
00331       RoadSearchCloud::RecHitVector recHits_inner = recHits_start;
00332       RoadSearchCloud::RecHitVector recHits_outer = the_recHits_middle;
00333       std::set<const DetLayer*> good_layers = the_good_layers;
00334       unsigned int ngoodlayers = good_layers.size();
00335 
00336       if (debug_)
00337         std::cout<<"Found " << recHits_inner.size() << " inner hits and " << recHits_outer.size() << " outer hits" << std::endl;
00338 
00339       // collect hits in useful layers
00340       std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > > goodHits;
00341       // mark layers that will be skipped in first pass
00342       std::set<const DetLayer*> skipped_layers;
00343       std::map<int, const DetLayer*> skipped_layer_detmap;
00344 
00345       
00346       goodHits.push_back(*ilyr0); // save hits from starting layer
00347       // save hits from other good layers
00348       for (std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > >::iterator ilyr = ilyr0+1;
00349          ilyr != RecHitsByLayer.end(); ++ilyr) {
00350         if (good_layers.find(ilyr->first) != good_layers.end()){
00351           goodHits.push_back(*ilyr);
00352         }
00353         else {
00354           skipped_layers.insert(ilyr->first);
00355           std::map<const DetLayer*, int>::iterator ilr = layer_reference.find(ilyr->first);
00356           if (ilr != layer_reference.end())
00357             skipped_layer_detmap.insert(std::make_pair(ilr->second,ilyr->first));
00358           else
00359             if (debug_) std::cout<<"Couldn't find thisLayer to insert into map..."<<std::endl;
00360         }
00361       }
00362 
00363       // try various hit combinations
00364       for (RoadSearchCloud::RecHitVector::const_iterator innerHit = recHits_inner.begin();
00365            innerHit != recHits_inner.end(); ++innerHit) {
00366 
00367         const DetLayer* innerHitLayer =
00368           theMeasurementTracker->geometricSearchTracker()->detLayer((*innerHit)->geographicalId());
00369 
00370 
00371         RoadSearchCloud::RecHitVector::iterator middleHit, outerHit;
00372         RoadSearchCloud::RecHitVector::iterator firstHit, lastHit;
00373 
00374         bool triplets = (CosmicReco_ && (magField->inTesla(GlobalPoint(0,0,0)).mag() > 0.01));
00375         
00376         if (!triplets){
00377           firstHit = recHits_outer.begin();
00378           lastHit  = recHits_outer.end();
00379         }
00380         else if (triplets){
00381           firstHit = recHits_outer.begin()+1;
00382           lastHit = recHits_outer.end();
00383         }
00384 
00385         for (RoadSearchCloud::RecHitVector::iterator outerHit = firstHit; outerHit != lastHit; ++outerHit) {
00386           
00387           const DetLayer* middleHitLayer = 0;
00388           if (triplets){
00389             middleHit = outerHit-1;
00390             middleHitLayer = theMeasurementTracker->geometricSearchTracker()->detLayer((*middleHit)->geographicalId());
00391           }
00392           const DetLayer* outerHitLayer =
00393             theMeasurementTracker->geometricSearchTracker()->detLayer((*outerHit)->geographicalId());
00394           if (middleHitLayer == outerHitLayer) continue;
00395 
00396           FreeTrajectoryState fts;
00397           if (!triplets){
00398             if (debug_){
00399               std::map<const DetLayer*, int>::iterator ilro = layer_reference.find(outerHitLayer);
00400               if (ilro != layer_reference.end()) {
00401                 std::cout << "Try trajectory with Inner Hit on Layer " << ilayer0 << " and  " ;
00402                 std::cout << "Outer Hit on Layer " << ilro->second << std::endl;
00403               }
00404             }
00405             fts = initialTrajectory(es,*innerHit,*outerHit);
00406           }
00407           else if (triplets){
00408             if (debug_){
00409               std::map<const DetLayer*, int>::iterator ilrm = layer_reference.find(middleHitLayer);
00410               std::map<const DetLayer*, int>::iterator ilro = layer_reference.find(outerHitLayer);
00411               if (ilro != layer_reference.end() && ilrm != layer_reference.end()) {
00412                 std::cout << "Try trajectory with Hits on Layers " << ilayer0 << " , "
00413                           << ilrm->second <<  " and  " << ilro->second << std::endl;
00414               }
00415             }
00416             fts = initialTrajectoryFromTriplet(es,*innerHit,*middleHit,*outerHit);
00417           }
00418 
00419           if (!fts.hasError()) continue;
00420           if (debug_) std::cout<<"FTS: " << fts << std::endl;
00421 
00422           Trajectory seedTraj = createSeedTrajectory(fts,*innerHit,innerHitLayer);
00423 
00424           std::vector<Trajectory> rawTrajectories;          
00425           if (seedTraj.isValid() && !seedTraj.measurements().empty() ) rawTrajectories.push_back(seedTraj);//GC
00426           //rawTrajectories.push_back(seedTraj);
00427 
00428           int ntested = 0;
00429           // now loop on hits
00430           std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > >::iterator ilyr_start = (goodHits.begin()+1);
00431           for (std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > >::iterator ilhv = ilyr_start;
00432                ilhv != goodHits.end(); ++ilhv) {
00433             RoadSearchCloud::RecHitVector& hits = ilhv->second;
00434             //std::vector<Trajectory> newTrajectories;
00435             ++ntested;
00436             if (debug_){
00437               std::map<const DetLayer*, int>::iterator ilr = cloud_layer_reference.find(ilhv->first);
00438               if (ilr != cloud_layer_reference.end())
00439                 std::cout << "extrapolating " << rawTrajectories.size() 
00440                           << " trajectories to layer " << ilr->second 
00441                           << " which has  " << hits.size() << " hits " << std::endl;
00442             }
00443             
00444             std::vector<Trajectory>newTrajectories;
00445             for (std::vector<Trajectory>::const_iterator it = rawTrajectories.begin();
00446                      it != rawTrajectories.end(); it++) {
00447               if (debug_) std::cout << "extrapolating Trajectory #" << it-rawTrajectories.begin() << std::endl;
00448               if (it->direction()==alongMomentum) thePropagator = theAloPropagator;//GC
00449               else thePropagator = theRevPropagator;
00450 
00451               std::vector<Trajectory> theTrajectories = extrapolateTrajectory(*it,hits,
00452                                                                               innerHitLayer, *outerHit, outerHitLayer);
00453               if (theTrajectories.empty()) {
00454                 if (debug_) std::cout<<" Could not add the hit in this layer " << std::endl;
00455                 if (debug_){
00456                   std::cout << " --> trajectory " << it-rawTrajectories.begin() 
00457                             << " has "<<it->recHits().size()<<" hits after "
00458                             << (ilhv-ilyr_start+1) << " tested (ntested=" <<ntested<<") "
00459                             << " --> misses="<< (ilhv-ilyr_start+1)-(it->recHits().size()-1)
00460                             << " but there are " << (goodHits.end() - ilhv)
00461                             <<" more layers in first pass and "<< skipped_layers.size() <<" skipped layers " <<std::endl;
00462                   
00463                   
00464                 }
00465                 // layer missed
00466                 if ((ilhv-ilyr_start+1)-(it->recHits().size()-1) <= nlost_max){
00467                   newTrajectories.push_back(*it);
00468                 }
00469               }
00470               else{ // added hits in this layers
00471                 for (std::vector<Trajectory>::const_iterator it = theTrajectories.begin();
00472                      it != theTrajectories.end(); it++) {
00473                   newTrajectories.push_back(*it);
00474                 }
00475               }
00476             } // end loop over rawTrajectories
00477             rawTrajectories = newTrajectories;
00478             if (newTrajectories.empty()) break;
00479           }
00480           if (rawTrajectories.size()==0){
00481             continue;
00482             if (debug_) std::cout<<" --> yields ZERO raw trajectories!" << std::endl;
00483           }
00484           if (debug_){
00485             for (std::vector<Trajectory>::const_iterator it = rawTrajectories.begin();
00486                  it != rawTrajectories.end(); it++) {
00487               std::cout << " --> yields trajectory with "<<it->recHits().size()<<" hits with chi2="
00488                         <<it->chiSquared()<<" and is valid? "<<it->isValid() <<std::endl;
00489             }
00490           }
00491           std::vector<Trajectory> rawCleaned;
00492           theTrajectoryCleaner->clean(rawTrajectories);
00493           for (std::vector<Trajectory>::const_iterator itr = rawTrajectories.begin();
00494                itr != rawTrajectories.end(); ++itr) {
00495             // see how many layers have been found
00496             if (!itr->isValid()) continue;
00497             std::set<const DetLayer*> used_layers;
00498             Trajectory::DataContainer tmv = itr->measurements();
00499             for (Trajectory::DataContainer::iterator itm = tmv.begin();
00500                  itm != tmv.end(); ++itm) {
00501               TransientTrackingRecHit::ConstRecHitPointer rh = itm->recHit();
00502               if (!rh->isValid()) continue;
00503               used_layers.insert(theMeasurementTracker->geometricSearchTracker()->detLayer(rh->geographicalId()));
00504             }
00505 
00506             // need to subtract 1 from used_layers since it includes the starting layer
00507             if (debug_) std::cout<<"Used " << (used_layers.size()-1) << " layers out of " << ngoodlayers
00508                                  << " good layers, so " << ngoodlayers - (used_layers.size()-1) << " missed "
00509                                  << std::endl;
00510             if ((int)used_layers.size() < nFoundMin_) continue;
00511             unsigned int nlostlayers = ngoodlayers - (used_layers.size()-1);
00512             if (nlostlayers > nlost_max) continue;
00513             
00514             rawCleaned.push_back(*itr);
00515             
00516           }
00517           if (!rawCleaned.empty()) {
00518             ChunkTrajectories.insert(ChunkTrajectories.end(), rawCleaned.begin(), rawCleaned.end());
00519           }
00520         } // END LOOP OVER OUTER HITS
00521       } // END LOOP OVER INNER HITS
00522       // At this point we have made all the trajectories from the low occupancy layers
00523       // We clean these trajectories first, and then try to add hits from the skipped layers
00524       
00525       //    }
00526       if (debug_) std::cout << "Clean the " << ChunkTrajectories.size()<<" trajectories for this chunk" << std::endl;
00527       // clean the intermediate result
00528       theTrajectoryCleaner->clean(ChunkTrajectories);
00529       for (std::vector<Trajectory>::const_iterator it = ChunkTrajectories.begin();
00530            it != ChunkTrajectories.end(); it++) {
00531         if (it->isValid())  CleanChunks.push_back(*it);
00532       }
00533       if (debug_) std::cout <<"After cleaning there are " << CleanChunks.size() << " trajectories for this chunk" << std::endl;
00534 
00535       
00536       // *********************  BEGIN NEW ADDITION      
00537       
00538       //
00539       // Step 2: recover measurements from busy layers
00540       //
00541       
00542       std::vector<Trajectory> extendedChunks;
00543       
00544 
00545       // see if there are layers that we skipped
00546 
00547       if (debug_){
00548         if (skipped_layers.empty()) {
00549           std::cout << "all layers were used in first pass" << std::endl;
00550         } else {
00551           std::cout << "There are " << skipped_layer_detmap.size() << " skipped layers:";
00552           for (std::map<int, const DetLayer*>::const_iterator imap = skipped_layer_detmap.begin();
00553                imap!=skipped_layer_detmap.end(); imap++){
00554             std::cout<< " " <<imap->first;
00555           }
00556           std::cout << std::endl;
00557         }
00558       }
00559       
00560       for (std::vector<Trajectory>::const_iterator i = CleanChunks.begin();
00561            i != CleanChunks.end(); i++) {
00562         if (!(*i).isValid()) continue;
00563         if (debug_) std::cout<< "Now process CleanChunk trajectory " << i-CleanChunks.begin() << std::endl;
00564         bool all_layers_used = false;
00565         if (skipped_layers.empty() && i->measurements().size() >= theNumHitCut) {
00566           if (debug_) std::cout<<"The trajectory has " << i->measurements().size() 
00567                                << " hits from a cloud of " << RecHitsByLayer.size() 
00568                                << " layers and a chunk of " << (RecHitsByLayer.size() - ilayer0) << " layers " << std::endl;
00569           extendedChunks.insert(extendedChunks.end(), *i);
00570           if (i->measurements().size() >= (RecHitsByLayer.size() - ilayer0)){
00571             all_layers_used = true;
00572             break;
00573           }
00574         } 
00575         else {
00576           
00577           Trajectory temWptraj = *i;
00578           Trajectory::DataContainer tmv = (*i).measurements();
00579           if (tmv.size()+skipped_layer_detmap.size() < theNumHitCut) continue;          
00580 
00581           // Debug dump of hits
00582           if (debug_){
00583             for (Trajectory::DataContainer::const_iterator ih=tmv.begin();
00584                  ih!=tmv.end();++ih){
00585               TransientTrackingRecHit::ConstRecHitPointer rh = ih->recHit();
00586               const DetLayer* Layer =
00587                 theMeasurementTracker->geometricSearchTracker()->detLayer(rh->geographicalId());      
00588               std::map<const DetLayer*, int>::iterator ilr = cloud_layer_reference.find(Layer);
00589               if (ilr != cloud_layer_reference.end())
00590                 std::cout << "   Hit #"<<ih-tmv.begin() << " of " << tmv.size()
00591                           <<" is on Layer " << ilr->second << std::endl;
00592               else 
00593                 std::cout << "   Layer for Hit #"<<ih-tmv.begin() <<" can't be found " << std::endl;
00594               std::cout<<" updatedState:\n" << ih->updatedState() << std::endl;
00595               std::cout<<" predictState:\n" << ih->predictedState() << std::endl;
00596             }
00597           }
00598           
00599           // Loop over the layers in the cloud
00600           
00601           std::set<const DetLayer*> final_layers;
00602           Trajectory::DataContainer::const_iterator im = tmv.begin();
00603           Trajectory::DataContainer::const_iterator im2 = tmv.begin();
00604           
00605           TrajectoryMeasurement firstMeasurement = i->firstMeasurement();
00606           const DetLayer* firstDetLayer = 
00607             theMeasurementTracker->geometricSearchTracker()->detLayer(firstMeasurement.recHit()->geographicalId());
00608           
00609           std::vector<Trajectory> freshStartv = theSmoother->trajectories(*i);
00610           
00611           if(debug_) std::cout<<"Smoothing has returned " << freshStartv.size() <<" trajectory " << std::endl;
00612           if (!freshStartv.empty()){
00613              if(debug_)  std::cout<< "Smoothing of trajectory " <<i-CleanChunks.begin() << " has succeeded with " << freshStartv.begin()->measurements().size() << " hits and a chi2 of " << freshStartv.begin()->chiSquared() <<" for " << freshStartv.begin()->ndof() << " DOF.  Now add hits." <<std::endl;
00614           } else {
00615              if (debug_) std::cout<< "Smoothing of trajectory " <<i-CleanChunks.begin() <<" has failed"<<std::endl;
00616              continue;
00617           }
00618           
00619           Trajectory freshStart = *freshStartv.begin();
00620           std::vector<TrajectoryMeasurement> freshStartTM = freshStart.measurements();
00621           
00622           if (debug_) {
00623              for (std::vector<TrajectoryMeasurement>::const_iterator itm = freshStartTM.begin();itm != freshStartTM.end(); ++itm){
00624                 std::cout<<"Trajectory hit " << itm-freshStartTM.begin() <<" updatedState:\n" << itm->updatedState() << std::endl;
00625              }
00626           }
00627 
00628           TrajectoryStateOnSurface NewFirstTsos = freshStart.lastMeasurement().updatedState();
00629           if(debug_) std::cout<<"NewFirstTSOS is valid? " << NewFirstTsos.isValid() << std::endl;
00630           if(debug_) std::cout << " NewFirstTSOS:\n " << NewFirstTsos << std::endl;
00631           TransientTrackingRecHit::ConstRecHitPointer rh = freshStart.lastMeasurement().recHit();
00632 
00633           if(debug_) {
00634              std::cout<< "First hit for fresh start on det " << rh->det() << ", r/phi/z = " << rh->globalPosition().perp() << " " << rh->globalPosition().phi() << " " << rh->globalPosition().z();
00635           }
00636           
00637           PTrajectoryStateOnDet const & pFirstState = trajectoryStateTransform::persistentState(NewFirstTsos,
00638                                                                                           rh->geographicalId().rawId());
00639           edm::OwnVector<TrackingRecHit> newHits;
00640           newHits.push_back(rh->hit()->clone());
00641           
00642           TrajectorySeed tmpseed = TrajectorySeed(pFirstState, 
00643                                                   newHits,
00644                                                   i->direction());
00645 
00646           thePropagator = theAloPropagator;
00647           if (i->direction()==oppositeToMomentum) thePropagator = theRevPropagator;
00648 
00649           
00650           
00651           Trajectory newTrajectory(tmpseed,tmpseed.direction());
00652           
00653           const GeomDet* det = trackerGeom->idToDet(rh->geographicalId());
00654           TrajectoryStateOnSurface invalidState(new BasicSingleTrajectoryState(det->surface()));
00655           newTrajectory.push(TrajectoryMeasurement(invalidState, NewFirstTsos, rh, 0, firstDetLayer));
00656           final_layers.insert(firstDetLayer);
00657 
00658           if(debug_) std::cout << "TRAJ is valid: " << newTrajectory.isValid() <<std::endl;
00659 
00660           TrajectoryStateOnSurface testTsos = newTrajectory.measurements().back().updatedState();
00661           
00662           if(debug_) {
00663             std::cout << "testTSOS is valid!!" << testTsos.isValid() << std::endl;
00664             std::cout << " testTSOS (x/y/z): " << testTsos.globalPosition().x()<< " / " << testTsos.globalPosition().y()<< " / " << testTsos.globalPosition().z() << std::endl;
00665             std::cout << " local position x: " << testTsos.localPosition().x() << "+-" << sqrt(testTsos.localError().positionError().xx()) << std::endl;
00666           }
00667 
00668           if (firstDetLayer != ilyr0->first){
00669             if (debug_) std::cout<<"!!! ERROR !!! firstDetLayer ("<<firstDetLayer<<") != ilyr0 ( " <<ilyr0->first <<")"<< std::endl;
00670           }          
00671           ++im;
00672 
00673           if (debug_){
00674             std::map<const DetLayer*, int>::iterator ilr = cloud_layer_reference.find(firstDetLayer);
00675             if (ilr != cloud_layer_reference.end() ){
00676               std::cout << "   First hit is on layer  " << ilr->second << std::endl;
00677             }
00678           }
00679           for (std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > >::iterator ilyr = ilyr0+1;
00680                ilyr != RecHitsByLayer.end(); ++ilyr) {
00681 
00682             TrajectoryStateOnSurface predTsos;
00683             TrajectoryStateOnSurface currTsos;
00684             TrajectoryMeasurement tm;
00685 
00686             if(debug_)
00687               std::cout<<"Trajectory has " << newTrajectory.measurements().size() << " measurements with " << (RecHitsByLayer.end()-ilyr)
00688                        << " remaining layers " << std::endl;
00689 
00690             if (im != tmv.end()) im2 = im;
00691             TransientTrackingRecHit::ConstRecHitPointer rh = im2->recHit(); // Current 
00692             if (rh->isValid() && 
00693                 theMeasurementTracker->geometricSearchTracker()->detLayer(rh->geographicalId()) == ilyr->first) {
00694               
00695                 if (debug_) std::cout<<"   Layer " << ilyr-RecHitsByLayer.begin() <<" has a good hit " << std::endl;
00696                 ++im;
00697                 
00698                 const GeomDet* det = trackerGeom->idToDet(rh->geographicalId());
00699 
00700                 currTsos = newTrajectory.measurements().back().updatedState();
00701                 predTsos = thePropagator->propagate(currTsos, det->surface());
00702                 if (!predTsos.isValid()) continue;
00703                 GlobalVector propagationDistance = predTsos.globalPosition() - currTsos.globalPosition();
00704                 if (propagationDistance.mag() > maxPropagationDistance) continue;
00705                 MeasurementEstimator::HitReturnType est = theEstimator->estimate(predTsos, *rh);
00706                 if(debug_) {
00707                   std::cout << "Propagation distance2 is " << propagationDistance.mag() << std::endl;
00708                   std::cout << "predTSOS is valid!!" << std::endl;
00709                   std::cout << " predTSOS (x/y/z): " << predTsos.globalPosition().x()<< " / " << predTsos.globalPosition().y()<< " / " << predTsos.globalPosition().z() << std::endl;
00710                   std::cout << " local position x: " << predTsos.localPosition().x() << "+-" << sqrt(predTsos.localError().positionError().xx()) << std::endl;
00711                   std::cout << " local position y: " << predTsos.localPosition().y() << "+-" << sqrt(predTsos.localError().positionError().yy()) << std::endl;
00712                   std::cout << "currTSOS is valid!! " << currTsos.isValid() <<  std::endl;
00713                   std::cout << " currTSOS (x/y/z): " << currTsos.globalPosition().x()<< " / " << currTsos.globalPosition().y()<< " / " << currTsos.globalPosition().z() << std::endl;
00714                   std::cout << " local position x: " << currTsos.localPosition().x() << "+-" << sqrt(currTsos.localError().positionError().xx()) << std::endl;
00715                   std::cout << " local position y: " << currTsos.localPosition().y() << "+-" << sqrt(currTsos.localError().positionError().yy()) << std::endl;
00716                 }
00717 
00718                 if (!est.first) {
00719                   if (debug_) std::cout<<"Failed to add one of the original hits on a low occupancy layer!!!!" << std::endl;
00720                   continue;
00721                 }
00722                 currTsos = theUpdator->update(predTsos, *rh);
00723                 tm = TrajectoryMeasurement(predTsos, currTsos, &(*rh),est.second,ilyr->first);
00724 
00725                 const TrajectoryStateOnSurface theTSOS = newTrajectory.lastMeasurement().updatedState();
00726                 
00727                 //std::cout << "11TsosBefore (x/y/z): " << theTSOS.globalPosition().x()<< " / " << theTSOS.globalPosition().y()<< " / " << theTSOS.globalPosition().z() << std::endl;
00728                 //std::cout << " 11local position x: " << theTSOS.localPosition().x() << "+-" << sqrt(theTSOS.localError().positionError().xx()) << std::endl;
00729                 //std::cout << " 11local position y: " << theTSOS.localPosition().y() << "+-" << sqrt(theTSOS.localError().positionError().yy()) << std::endl;
00730 
00731 
00732 
00733                 newTrajectory.push(tm,est.second);
00734                 final_layers.insert(ilyr->first);                
00735             }       
00736             else{
00737               if (debug_) std::cout<<"   Layer " << ilyr-RecHitsByLayer.begin() <<" is one of the skipped layers " << std::endl;
00738               
00739               //collect hits in the skipped layer
00740               edm::OwnVector<TrackingRecHit> skipped_hits;
00741               std::set<const GeomDet*> dets;
00742               for (RoadSearchCloud::RecHitVector::const_iterator ih = ilyr->second.begin();
00743                    ih != ilyr->second.end(); ++ih) {
00744                 skipped_hits.push_back((*ih)->clone());
00745                 dets.insert(trackerGeom->idToDet((*ih)->geographicalId()));
00746               }
00747               
00748               if(debug_){
00749                 std::cout<<"   ---> probing missing hits (nh="<< skipped_hits.size() << ", nd=" << dets.size() 
00750                          << ")  in layer " <<  ilyr-RecHitsByLayer.begin() <<std::endl;
00751               }
00752 
00753               const TrajectoryStateOnSurface theTSOS = newTrajectory.lastMeasurement().updatedState();
00754               
00755               //std::cout << "TsosBefore (x/y/z): " << theTSOS.globalPosition().x()<< " / " << theTSOS.globalPosition().y()<< " / " << theTSOS.globalPosition().z() << std::endl;
00756               //std::cout << " local position x: " << theTSOS.localPosition().x() << "+-" << sqrt(theTSOS.localError().positionError().xx()) << std::endl;
00757               //std::cout << " local position y: " << theTSOS.localPosition().y() << "+-" << sqrt(theTSOS.localError().positionError().yy()) << std::endl;
00758 
00759               std::vector<TrajectoryMeasurement> theGoodHits = FindBestHits(theTSOS,dets,theHitMatcher,skipped_hits);
00760               if (!theGoodHits.empty()){
00761                 final_layers.insert(ilyr->first);
00762                 if (debug_) std::cout<<"Found " << theGoodHits.size() << " good hits to add" << std::endl;
00763                 for (std::vector<TrajectoryMeasurement>::const_iterator im=theGoodHits.begin();im!=theGoodHits.end();++im){
00764                   newTrajectory.push(*im,im->estimate());
00765                 }
00766               }
00767             }
00768           } // END 2nd PASS LOOP OVER LAYERS IN CLOUD
00769           
00770           if (debug_) std::cout<<"Finished loop over layers in cloud.  Trajectory now has " <<newTrajectory.measurements().size()
00771                                << " hits. " << std::endl;
00772           if (debug_) std::cout<<"The trajectory has " << newTrajectory.measurements().size() <<" hits on " << final_layers.size()
00773                                << " layers from a cloud of " << RecHitsByLayer.size() 
00774                                << " layers and a chunk of " << (RecHitsByLayer.size() - ilayer0) << " layers " << std::endl;
00775           if (newTrajectory.measurements().size() >= theNumHitCut)
00776             extendedChunks.insert(extendedChunks.end(), newTrajectory);
00777           if (final_layers.size() >= (RecHitsByLayer.size() - ilayer0)){
00778             if (debug_) std::cout<<"All layers of the chunk have been used..." << std::endl;
00779             all_layers_used = true;
00780           }
00781         }  // END ELSE TO RECOVER SKIPPED LAYERS
00782         if (all_layers_used) {
00783           if (debug_) std::cout << "All layers were used, so break....." << std::endl;
00784           all_chunk_layers_used = true;
00785           break;
00786         }
00787         if (debug_) std::cout<<"Going to next clean chunk....." << std::endl;
00788       } // END LOOP OVER CLEAN CHUNKS
00789       if (debug_) std::cout<< "Now Clean the " << extendedChunks.size() << " extended chunks " <<std::endl;
00790       if (extendedChunks.size() > 1) theTrajectoryCleaner->clean(extendedChunks);
00791       for (std::vector<Trajectory>::const_iterator it = extendedChunks.begin();
00792            it != extendedChunks.end(); it++) {
00793         if (it->isValid()) CloudTrajectories.push_back(*it);
00794       }
00795       if (all_chunk_layers_used) break;
00796     }
00797     
00798     // ********************* END NEW ADDITION
00799     
00800     if (debug_) std::cout<< "Finished with the cloud, so clean the " 
00801                          << CloudTrajectories.size() << " cloud trajectories "<<std::endl ;
00802     theTrajectoryCleaner->clean(CloudTrajectories);
00803     for (std::vector<Trajectory>::const_iterator it = CloudTrajectories.begin();
00804          it != CloudTrajectories.end(); it++) {
00805       if (it->isValid()) FinalTrajectories.push_back(*it);
00806     }
00807     
00808     if (debug_) std::cout<<" Final trajectories now has size " << FinalTrajectories.size()<<std::endl ;
00809     
00810   } // End loop over Cloud Collection
00811 
00812 
00813   if (debug_) std::cout<< " Finished loop over all clouds " <<std::endl;
00814 
00815   output = PrepareTrackCandidates(FinalTrajectories);
00816 
00817   delete theAloPropagator;
00818   delete theRevPropagator; 
00819   delete theAnalyticalPropagator;
00820   delete theHitMatcher;
00821   delete theSmoother;
00822   
00823   if (debug_ || debugCosmics_) std::cout<< "Found " << output.size() << " track candidate(s)."<<std::endl;
00824 
00825 }
00826 
00827 
00828 //edm::OwnVector<TrackingRecHit> 
00829 std::vector<TrajectoryMeasurement>
00830 RoadSearchTrackCandidateMakerAlgorithm::FindBestHitsByDet(const TrajectoryStateOnSurface& tsosBefore,
00831                                                           const std::set<const GeomDet*>& theDets,
00832                                                           edm::OwnVector<TrackingRecHit>& theHits)
00833 //                       edm::OwnVector<TrackingRecHit> *theBestHits)
00834 {
00835   
00836   //edm::OwnVector<TrackingRecHit> theBestHits;
00837   std::vector<TrajectoryMeasurement> theBestHits;
00838   
00839   // extrapolate to all detectors from the list
00840   std::map<const GeomDet*, TrajectoryStateOnSurface> dmmap;
00841   for (std::set<const GeomDet*>::iterator idet = theDets.begin();
00842        idet != theDets.end(); ++idet) {
00843     TrajectoryStateOnSurface predTsos = thePropagator->propagate(tsosBefore, (**idet).surface());
00844     if (predTsos.isValid()) {
00845       GlobalVector propagationDistance = predTsos.globalPosition() - tsosBefore.globalPosition();
00846       if (propagationDistance.mag() > maxPropagationDistance) continue; 
00847       dmmap.insert(std::make_pair(*idet, predTsos));
00848     }
00849   }
00850   // evaluate hit residuals
00851   std::map<const GeomDet*, TrajectoryMeasurement> dtmmap;
00852   for (edm::OwnVector<TrackingRecHit>::const_iterator ih = theHits.begin();
00853        ih != theHits.end(); ++ih) {
00854     const GeomDet* det = trackerGeom->idToDet(ih->geographicalId());
00855     
00856     std::map<const GeomDet*, TrajectoryStateOnSurface>::iterator idm = dmmap.find(det);
00857     if (idm == dmmap.end()) continue;
00858     TrajectoryStateOnSurface predTsos = idm->second;
00859     TransientTrackingRecHit::RecHitPointer rhit = ttrhBuilder->build(&(*ih));
00860     MeasurementEstimator::HitReturnType est = theEstimator->estimate(predTsos, *rhit);
00861     
00862     // Take the best hit on a given Det
00863     if (est.first) {
00864       TrajectoryStateOnSurface currTsos = theUpdator->update(predTsos, *rhit);
00865       std::map<const GeomDet*, TrajectoryMeasurement>::iterator idtm = dtmmap.find(det);
00866       if (idtm == dtmmap.end()) {
00867         TrajectoryMeasurement tm(predTsos, currTsos, &(*rhit),est.second,
00868                                  theMeasurementTracker->geometricSearchTracker()->detLayer(ih->geographicalId()));
00869         dtmmap.insert(std::make_pair(det, tm));
00870       } else if (idtm->second.estimate() > est.second) {
00871         dtmmap.erase(idtm);
00872         TrajectoryMeasurement tm(predTsos, currTsos, &(*rhit),est.second,
00873                                  theMeasurementTracker->geometricSearchTracker()->detLayer(ih->geographicalId()));
00874         dtmmap.insert(std::make_pair(det, tm));
00875       }
00876     }
00877   }
00878 
00879   if (!dtmmap.empty()) {
00880     for (std::map<const GeomDet*, TrajectoryMeasurement>::iterator idtm = dtmmap.begin();
00881          idtm != dtmmap.end(); ++idtm) {
00882       TrajectoryMeasurement itm = idtm->second;
00883       theBestHits.push_back(itm);
00884     }
00885   }
00886   
00887   return theBestHits;
00888 }
00889 
00890 
00891 std::vector<TrajectoryMeasurement>
00892 RoadSearchTrackCandidateMakerAlgorithm::FindBestHit(const TrajectoryStateOnSurface& tsosBefore,
00893                                                     const std::set<const GeomDet*>& theDets,
00894                                                     edm::OwnVector<TrackingRecHit>& theHits)
00895 {
00896   
00897   std::vector<TrajectoryMeasurement> theBestHits;
00898   
00899   double bestchi = 10000.0;
00900   // extrapolate to all detectors from the list
00901   std::map<const GeomDet*, TrajectoryStateOnSurface> dmmap;
00902   for (std::set<const GeomDet*>::iterator idet = theDets.begin();
00903        idet != theDets.end(); ++idet) {
00904     TrajectoryStateOnSurface predTsos = thePropagator->propagate(tsosBefore, (**idet).surface());
00905     if (predTsos.isValid()) {
00906       GlobalVector propagationDistance = predTsos.globalPosition() - tsosBefore.globalPosition();
00907       if (propagationDistance.mag() > maxPropagationDistance) continue; 
00908       dmmap.insert(std::make_pair(*idet, predTsos));
00909     }
00910   }
00911   // evaluate hit residuals
00912   std::map<const GeomDet*, TrajectoryMeasurement> dtmmap;
00913   for (edm::OwnVector<TrackingRecHit>::const_iterator ih = theHits.begin();
00914        ih != theHits.end(); ++ih) {
00915     const GeomDet* det = trackerGeom->idToDet(ih->geographicalId());
00916     
00917     std::map<const GeomDet*, TrajectoryStateOnSurface>::iterator idm = dmmap.find(det);
00918     if (idm == dmmap.end()) continue;
00919     TrajectoryStateOnSurface predTsos = idm->second;
00920     TransientTrackingRecHit::RecHitPointer rhit = ttrhBuilder->build(&(*ih));
00921     MeasurementEstimator::HitReturnType est = theEstimator->estimate(predTsos, *rhit);
00922     
00923     // Take the best hit on any Det
00924     if (est.first) {
00925       TrajectoryStateOnSurface currTsos = theUpdator->update(predTsos, *rhit);
00926       if (est.second < bestchi){
00927         if(!theBestHits.empty()){
00928           theBestHits.erase(theBestHits.begin());
00929         }
00930         bestchi = est.second;
00931         TrajectoryMeasurement tm(predTsos, currTsos, &(*rhit),est.second,
00932                                  theMeasurementTracker->geometricSearchTracker()->detLayer(ih->geographicalId()));      
00933         theBestHits.push_back(tm);
00934       }
00935     }
00936   }
00937   
00938   if (theBestHits.empty()){
00939     if (debug_) std::cout<< "no hits to add! " <<std::endl;
00940   }
00941   else{
00942     for (std::vector<TrajectoryMeasurement>::const_iterator im=theBestHits.begin();im!=theBestHits.end();++im)
00943       if (debug_) std::cout<<" Measurement on layer "
00944                            << theMeasurementTracker->geometricSearchTracker()->detLayer(im->recHit()->geographicalId())
00945                            << " with estimate " << im->estimate()<<std::endl ;
00946   }
00947   
00948   return theBestHits;
00949 }
00950 
00951 std::vector<TrajectoryMeasurement>
00952 RoadSearchTrackCandidateMakerAlgorithm::FindBestHits(const TrajectoryStateOnSurface& tsosBefore,
00953                                                      const std::set<const GeomDet*>& theDets,
00954                                                      const SiStripRecHitMatcher* theHitMatcher,
00955                                                      edm::OwnVector<TrackingRecHit>& theHits)
00956 //                       edm::OwnVector<TrackingRecHit> *theBestHits)
00957 {
00958   
00959 
00960   std::vector<TrajectoryMeasurement> theBestHits;
00961   //TrajectoryMeasurement* theBestTM = 0;
00962   TrajectoryMeasurement theBestTM;
00963   bool firstTM = true;
00964   
00965   // extrapolate to all detectors from the list
00966   std::map<const GeomDet*, TrajectoryStateOnSurface> dmmap;
00967   for (std::set<const GeomDet*>::iterator idet = theDets.begin();
00968        idet != theDets.end(); ++idet) {
00969     TrajectoryStateOnSurface predTsos = thePropagator->propagate(tsosBefore, (**idet).surface());
00970     if (predTsos.isValid()) {
00971       GlobalVector propagationDistance = predTsos.globalPosition() - tsosBefore.globalPosition();
00972       if (propagationDistance.mag() > maxPropagationDistance) continue; 
00973       dmmap.insert(std::make_pair(*idet, predTsos));
00974     }
00975   }
00976 
00977   if(debug_) std::cout << "TRAJECTORY INTERSECTS " << dmmap.size() << " DETECTORS." << std::endl;
00978 
00979   // evaluate hit residuals
00980   std::map<const GeomDet*, TrajectoryMeasurement> dtmmap;
00981   for (edm::OwnVector<TrackingRecHit>::const_iterator ih = theHits.begin(); ih != theHits.end(); ++ih) {
00982     const GeomDet* det = trackerGeom->idToDet(ih->geographicalId());
00983     //if (*isl != theMeasurementTracker->geometricSearchTracker()->detLayer(ih->geographicalId())) 
00984     //  std::cout <<" You don't know what you're doing !!!!" << std::endl;
00985     
00986     std::map<const GeomDet*, TrajectoryStateOnSurface>::iterator idm = dmmap.find(det);
00987     if (idm == dmmap.end()) continue;
00988     TrajectoryStateOnSurface predTsos = idm->second;
00989     TransientTrackingRecHit::RecHitPointer rhit = ttrhBuilder->build(&(*ih));
00990     
00991     const SiStripMatchedRecHit2D *origHit = dynamic_cast<const SiStripMatchedRecHit2D *>(&(*ih));
00992     if (origHit !=0){
00993       const GluedGeomDet *gdet = dynamic_cast<const GluedGeomDet*>(det);
00994       const SiStripMatchedRecHit2D *corrHit = theHitMatcher->match(origHit,gdet,predTsos.localDirection());
00995       if (corrHit!=0){
00996         rhit = ttrhBuilder->build(&(*corrHit));
00997         delete corrHit;
00998       }
00999     }
01000 
01001     if (debug_) {
01002       std::cout << "predTSOS (x/y/z): " << predTsos.globalPosition().x()<< " / " << predTsos.globalPosition().y()<< " / " << predTsos.globalPosition().z() << std::endl;
01003       std::cout << "local position x: " << predTsos.localPosition().x() << "+-" << sqrt(predTsos.localError().positionError().xx()) << std::endl;
01004       std::cout << "local position y: " << predTsos.localPosition().y() << "+-" << sqrt(predTsos.localError().positionError().yy()) << std::endl;
01005       std::cout << "rhit local position x: " << rhit->localPosition().x() << "+-" << sqrt(rhit->localPositionError().xx()) << std::endl;
01006       std::cout << "rhit local position y: " << rhit->localPosition().y() << "+-" << sqrt(rhit->localPositionError().yy()) << std::endl;
01007     }
01008  
01009     MeasurementEstimator::HitReturnType est = theEstimator->estimate(predTsos, *rhit);
01010     if (debug_) std::cout<< "hit " << ih-theHits.begin() 
01011                          << ": est = " << est.first << " " << est.second  <<std::endl;
01012     
01013     
01014     // Take the best hit on a given Det
01015     if (est.first) {
01016       TrajectoryMeasurement tm;
01017       TrajectoryStateOnSurface currTsos = theUpdator->update(predTsos, *rhit);
01018       std::map<const GeomDet*, TrajectoryMeasurement>::iterator idtm = dtmmap.find(det);
01019       if (idtm == dtmmap.end()) {
01020         tm = TrajectoryMeasurement (predTsos, currTsos, &(*rhit),est.second,
01021                                     theMeasurementTracker->geometricSearchTracker()->detLayer(ih->geographicalId()));
01022         dtmmap.insert(std::make_pair(det, tm));
01023       } else if (idtm->second.estimate() > est.second) {
01024         dtmmap.erase(idtm);
01025         tm = TrajectoryMeasurement(predTsos, currTsos, &(*rhit),est.second,
01026                                    theMeasurementTracker->geometricSearchTracker()->detLayer(ih->geographicalId()));
01027         dtmmap.insert(std::make_pair(det, tm));
01028       }
01029       if ((firstTM)){
01030         theBestTM = tm; 
01031         if (debug_) std::cout <<"Initialize best to " << theBestTM.estimate() << std::endl;
01032         firstTM = false;
01033       }
01034       else if (!firstTM) {
01035         if (debug_) std::cout << "Current best is " << theBestTM.estimate() << " while this hit is " << est.second;
01036         if (est.second < theBestTM.estimate()) {
01037           if (debug_) std::cout << " so replace it " ;
01038           theBestTM = tm;
01039         }
01040         if (debug_) std::cout << std::endl;
01041       }
01042     }
01043   }
01044   if (debug_) std::cout<< "Hits(Dets) to add: " << dtmmap.size() <<std::endl;
01045   if (!dtmmap.empty()) {
01046     
01047     std::vector<std::pair<TransientTrackingRecHit::ConstRecHitPointer, TrajectoryMeasurement*> > OverlapHits;
01048     for (std::map<const GeomDet*, TrajectoryMeasurement>::iterator idtm = dtmmap.begin();
01049          idtm != dtmmap.end(); ++idtm) {
01050       OverlapHits.push_back(std::make_pair(idtm->second.recHit(),&idtm->second));
01051       
01052       if (debug_) std::cout<<" Measurement on layer "
01053                            << theMeasurementTracker->geometricSearchTracker()->detLayer(idtm->second.recHit()->geographicalId())
01054                            << " with estimate " << idtm->second.estimate()<<std::endl ;
01055     }
01056     if (debug_)
01057       std::cout<<" Best  Measurement is on layer "
01058                << theMeasurementTracker->geometricSearchTracker()->detLayer(theBestTM.recHit()->geographicalId())
01059                << " with estimate " << theBestTM.estimate()<<std::endl ;
01060     
01061     
01062     if (dtmmap.size()==1){  // only one hit so we can just return that one
01063       for (std::map<const GeomDet*, TrajectoryMeasurement>::iterator idtm = dtmmap.begin();
01064            idtm != dtmmap.end(); ++idtm) {
01065         TrajectoryMeasurement itm = idtm->second;
01066         if (debug_) std::cout<<" Measurement on layer "
01067                              << theMeasurementTracker->geometricSearchTracker()->detLayer(itm.recHit()->geographicalId())
01068                              << " with estimate " << itm.estimate()<<std::endl ;
01069         theBestHits.push_back(itm);
01070       }
01071     }
01072     else if (dtmmap.size()>=2) { // try for the overlaps -- first have to sort inside out
01073       
01074       if (debug_) std::cout<<"Unsorted OverlapHits has size " <<OverlapHits.size() << std::endl;
01075       
01076       for (std::vector<std::pair<TransientTrackingRecHit::ConstRecHitPointer,TrajectoryMeasurement*> >::iterator irh =OverlapHits.begin();
01077            irh!=OverlapHits.end();++irh){
01078         if (debug_) std::cout << "Hit " << irh-OverlapHits.begin()
01079                               << " on det " << irh->first->det() 
01080                               << " detLayer " 
01081                               << theMeasurementTracker->geometricSearchTracker()->detLayer(irh->first->geographicalId())
01082                               << ", r/phi/z = "
01083                               << irh->first->globalPosition().perp() << " "
01084                               << irh->first->globalPosition().phi() << " "
01085                               << irh->first->globalPosition().z()
01086                               << std::endl;
01087       }
01088       
01089       std::sort( OverlapHits.begin(),OverlapHits.end(),SortHitTrajectoryPairsByGlobalPosition());
01090       if (debug_) std::cout<<"Sorted OverlapHits has size " <<OverlapHits.size() << std::endl;
01091       
01092       float workingBestChi2 = 1000000.0;
01093       std::vector<TrajectoryMeasurement> workingBestHits;
01094       
01095       std::vector<std::pair<TransientTrackingRecHit::ConstRecHitPointer,TrajectoryMeasurement*> >::iterator irh1;
01096       std::vector<std::pair<TransientTrackingRecHit::ConstRecHitPointer,TrajectoryMeasurement*> >::iterator irh2;
01097       for (irh1 =OverlapHits.begin(); irh1!=--OverlapHits.end(); ++irh1){
01098         theBestHits.clear();
01099         float running_chi2=0;
01100         if (debug_) std::cout << "Hit " << irh1-OverlapHits.begin()
01101                               << " on det " << irh1->first->det() 
01102                               << " detLayer " 
01103                               << theMeasurementTracker->geometricSearchTracker()->detLayer(irh1->first->geographicalId())
01104                               << ", r/phi/z = "
01105           
01106                               << irh1->first->globalPosition().perp() << " "
01107                               << irh1->first->globalPosition().phi() << " "
01108                               << irh1->first->globalPosition().z()
01109                               << std::endl;
01110         
01111         TrajectoryStateOnSurface currTsos = irh1->second->updatedState();
01112         TransientTrackingRecHit::ConstRecHitPointer rhit = irh1->first;
01113         theBestHits.push_back(*(irh1->second));
01114         if (debug_)  std::cout<<"Added first hit with chi2 = " << irh1->second->estimate() << std::endl;
01115         running_chi2 += irh1->second->estimate();
01116         for (irh2 = irh1; irh2!=OverlapHits.end(); ++irh2){
01117           if (irh2 == irh1) continue;
01118           TransientTrackingRecHit::ConstRecHitPointer rh = irh2->first;
01119           const GeomDet* det = irh2->first->det();
01120           // extrapolate the trajectory to the next hit
01121           TrajectoryStateOnSurface predTsos = thePropagator->propagate(currTsos, det->surface());
01122           // test if matches
01123           if (predTsos.isValid()){
01124             MeasurementEstimator::HitReturnType est = theEstimator->estimate(predTsos, *rh);
01125             if (debug_)  std::cout<<"Added overlap hit with est = " << est.first << "   " << est.second << std::endl;
01126             if (est.first){
01127               TrajectoryMeasurement tm(predTsos, currTsos, &(*rh),est.second,
01128                                        theMeasurementTracker->geometricSearchTracker()->detLayer(rh->geographicalId()));
01129               theBestHits.push_back(tm);
01130               running_chi2 += est.second ;
01131             }
01132             else { // couldn't add 2nd hit so return best single hit
01133             }
01134           }
01135           
01136         }
01137         if (theBestHits.size()==dtmmap.size()){ // added the best hit in every layer
01138           if (debug_) std::cout<<"Added all "<<theBestHits.size()<<" hits out of " << dtmmap.size() << std::endl;
01139           break;
01140         }
01141         // Didn't add hits from every Det
01142         if (theBestHits.size() < dtmmap.size()){
01143           if (debug_) std::cout<<"Added only "<<theBestHits.size()<<" hits out of " << dtmmap.size() << std::endl;
01144           // Take the combination with the most hits
01145           if (theBestHits.size() > workingBestHits.size()){
01146             if (debug_) std::cout<<"Current combo has more hits so replace best" << std::endl;
01147             workingBestHits = theBestHits;
01148           }
01149           // has same number of hits as best, so check chi2
01150           else if (theBestHits.size() == workingBestHits.size()){ 
01151             if (running_chi2< workingBestChi2){
01152               if (debug_) std::cout<<"Current combo has same # of hits but lower chi2 so replace best" << std::endl;
01153               workingBestHits = theBestHits;
01154               workingBestChi2 = running_chi2;
01155             }
01156           }
01157         }
01158       }
01159       if (theBestHits.size()<2){
01160         if (debug_) std::cout<<"Only one good hit in overlap"<<std::endl;
01161         if (debug_) std::cout<<" Added hit on layer on det " 
01162                              << theBestTM.recHit()->det() 
01163                              << " detLayer " 
01164                              << theMeasurementTracker->geometricSearchTracker()->detLayer(theBestTM.recHit()->geographicalId())
01165                              << ", r/phi/z = "
01166                              << theBestTM.recHit()->globalPosition().perp() << " "
01167                              << theBestTM.recHit()->globalPosition().phi() << " "
01168                              << theBestTM.recHit()->globalPosition().z()
01169                              << " with estimate " << theBestTM.estimate()<<std::endl ;
01170         theBestHits.clear();
01171         theBestHits.push_back(theBestTM);
01172       }
01173       
01174     }
01175     else {
01176       if (debug_)std::cout << "ERROR: Unexpected size from DTMMAP = " << dtmmap.size() << std::endl;
01177       theBestHits.push_back(theBestTM);
01178     }
01179   }
01180   
01181   return theBestHits;
01182 }
01183 
01184 
01185 //bool RoadSearchTrackCandidateMakerAlgorithm::chooseStartingLayers( RoadSearchCloud::RecHitVector& recHits, int ilayer0,
01186 bool RoadSearchTrackCandidateMakerAlgorithm::chooseStartingLayers( std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > >& recHitsByLayer,
01187                                                                    //int ilayer0,
01188                                                                    std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > >::iterator ilyr0,
01189                                                                    const std::multimap<int, const DetLayer*>& layer_map,
01190                                                                    std::set<const DetLayer*>& good_layers,
01191                                                                    std::vector<const DetLayer*>& middle_layers ,
01192                                                                    RoadSearchCloud::RecHitVector& recHits_middle)
01193 {
01194       const unsigned int max_middle_layers = 2;
01195 
01196       // consider the best nFoundMin layers + other layers with only one hit      
01197       // This has implications, based on the way we locate the hits.  
01198       // For now, use only the low occupancy layers in the first pass
01199       //const int nfound_min = min_chunk_length-1;
01200       //const int nfound_min = 4;
01201       std::multimap<int, const DetLayer*>::const_iterator ilm = layer_map.begin();
01202       int ngoodlayers = 0;
01203       while (ilm != layer_map.end()) {
01204         if (ngoodlayers >= nFoundMin_ && ilm->first > 1) break;
01205         //if (ilm->first > 1) break;
01206         good_layers.insert(ilm->second);
01207         ++ngoodlayers;
01208         ++ilm;
01209       }
01210 
01211       // choose intermediate layers
01212       for (std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > >::iterator ilayer = ilyr0+1;
01213            ilayer != recHitsByLayer.end(); ++ilayer) {
01214         // only use useful layers
01215         if (good_layers.find(ilayer->first) == good_layers.end()) continue;
01216         // only use stereo layers
01217         if (!CosmicReco_ && !lstereo[ilayer-recHitsByLayer.begin()]) continue;
01218         middle_layers.push_back(ilayer->first);
01219         if (middle_layers.size() >= max_middle_layers) break;
01220       }
01221       
01222       for (std::vector<const DetLayer*>::iterator ml = middle_layers.begin();
01223            ml!=middle_layers.end();++ml){
01224         unsigned int middle_layers_found = 0;
01225         for (std::vector<std::pair<const DetLayer*, RoadSearchCloud::RecHitVector > >::iterator ilyr = recHitsByLayer.begin();
01226              ilyr != recHitsByLayer.end(); ++ilyr) {
01227           if (ilyr->first == *ml){
01228             for (RoadSearchCloud::RecHitVector::const_iterator ih = ilyr->second.begin();
01229                  ih != ilyr->second.end(); ++ih) {
01230               recHits_middle.push_back(*ih);
01231             }
01232             ++middle_layers_found;
01233           }
01234           if (middle_layers_found == middle_layers.size()) continue;
01235         }
01236 
01237       }
01238       return (recHits_middle.size()>0);
01239 }
01240 
01241 FreeTrajectoryState RoadSearchTrackCandidateMakerAlgorithm::initialTrajectory(const edm::EventSetup& es,
01242                                                                               const TrackingRecHit* theInnerHit,
01243                                                                               const TrackingRecHit* theOuterHit)
01244 {
01245   FreeTrajectoryState fts;
01246 
01247           GlobalPoint inner = trackerGeom->idToDet(theInnerHit->geographicalId())->surface().toGlobal(theInnerHit->localPosition());
01248           GlobalPoint outer = trackerGeom->idToDet(theOuterHit->geographicalId())->surface().toGlobal(theOuterHit->localPosition());
01249           
01250           LogDebug("RoadSearch") << "inner hit: r/phi/z = "<< inner.perp() << " " << inner.phi() << " " << inner.z() ;
01251           LogDebug("RoadSearch") << "outer hit: r/phi/z = "<< outer.perp() << " " << outer.phi() << " " << outer.z() ;
01252           
01253           // hits should be reasonably separated in r
01254           const double dRmin = 0.1; // cm
01255           if (outer.perp() - inner.perp() < dRmin) return fts;
01256           //GlobalPoint vertexPos(0,0,0);
01257           const double dr2 = initialVertexErrorXY_*initialVertexErrorXY_;
01258           //const double dr2 = 0.0015*0.0015;
01259           //const double dr2 = 0.2*0.2;
01260           const double dz2 = 5.3*5.3;
01261 
01262           // linear z extrapolation of two hits have to be inside tracker ( |z| < 275 cm)
01263           FastLine linearFit(outer, inner);
01264           double z_0 = -linearFit.c()/linearFit.n2();
01265           if ( std::abs(z_0) > 275 && !CosmicReco_ ) return fts;
01266 
01267           GlobalError vertexErr(dr2,
01268                                 0, dr2,
01269                                 0, 0, dz2);
01270           //TrivialVertex vtx( vertexPos, vertexErr);
01271           //FastHelix helix(outerHit.globalPosition(),
01272           //              (*innerHit).globalPosition(),
01273           //              vtx.position());
01274           
01275           double x0=0.0,y0=0.0,z0=0.0;
01276           double phi0 = -999.0;
01277           if (NoFieldCosmic_){
01278             phi0=atan2(outer.y()-inner.y(),outer.x()-inner.x());
01279             thePropagator = theAloPropagator;//GC
01280             if (inner.y()<outer.y()){
01281               if (debug_) std::cout<<"Flipping direction!!!" << std::endl;
01282               thePropagator = theRevPropagator;
01283               phi0=phi0-M_PI;
01284             } 
01285             double alpha=atan2(inner.y(),inner.x());
01286             double d1=sqrt(inner.x()*inner.x()+inner.y()*inner.y());
01287             double d0=-d1*sin(alpha-phi0); x0=d0*sin(phi0); y0=-d0*cos(phi0);
01288             double l1=0.0,l2=0.0;
01289             if (fabs(cos(phi0))>0.1){
01290               l1=(inner.x()-x0)/cos(phi0);l2=(outer.x()-x0)/cos(phi0);
01291             }else{
01292               l1=(inner.y()-y0)/sin(phi0);l2=(outer.y()-y0)/sin(phi0);
01293             }
01294             z0=(l2*inner.z()-l1*outer.z())/(l2-l1);
01295           }
01296           //FastHelix helix(outer, inner, vertexPos, es);
01297           FastHelix helix(outer, inner, GlobalPoint(x0,y0,z0), es);
01298           if (!NoFieldCosmic_ && !helix.isValid()) return fts;
01299           
01300           AlgebraicSymMatrix55 C = AlgebraicMatrixID();
01301           float zErr = vertexErr.czz();
01302           float transverseErr = vertexErr.cxx(); // assume equal cxx cyy
01303           C(3, 3) = transverseErr;
01304           C(4, 4) = zErr;
01305           CurvilinearTrajectoryError initialError(C);
01306 
01307           if (NoFieldCosmic_) {
01308             TrackCharge q = 1;      
01309             FastLine flfit(outer, inner);
01310             double dzdr = -flfit.n1()/flfit.n2();
01311             if (inner.y()<outer.y()) dzdr*=-1;
01312 
01313             GlobalPoint XYZ0(x0,y0,z0);
01314             if (debug_) std::cout<<"Initial Point (x0/y0/z0): " << x0 <<'\t'<< y0 <<'\t'<< z0 << std::endl;
01315             GlobalVector PXYZ(cosmicSeedPt_*cos(phi0),
01316                               cosmicSeedPt_*sin(phi0),
01317                               cosmicSeedPt_*dzdr);
01318             GlobalTrajectoryParameters thePars(XYZ0,PXYZ,q,magField);
01319             AlgebraicSymMatrix66 CErr = AlgebraicMatrixID();
01320             CErr *= 5.0;
01321             // CErr(3,3) = (theInnerHit->localPositionError().yy()*theInnerHit->localPositionError().yy() +
01322             //           theOuterHit->localPositionError().yy()*theOuterHit->localPositionError().yy());
01323             fts = FreeTrajectoryState(thePars,
01324                                       CartesianTrajectoryError(CErr));
01325             if (debug_) std::cout<<"\nInitial CError (dx/dy/dz): " << CErr(1,1) <<'\t'<< CErr(2,2) <<'\t'<< CErr(3,3) << std::endl;
01326             if (debug_) std::cout<<"\n\ninner dy = " << theInnerHit->localPositionError().yy() <<"\t\touter dy = " << theOuterHit->localPositionError().yy() << std::endl;
01327           }
01328           else {
01329             fts = FreeTrajectoryState( helix.stateAtVertex().parameters(), initialError);
01330           }
01331           //                       RoadSearchSeedFinderAlgorithm::initialError( *outerHit, *(*innerHit),
01332           //                                  vertexPos, vertexErr));
01333 
01334           return fts;
01335 }
01336 
01337 FreeTrajectoryState RoadSearchTrackCandidateMakerAlgorithm::initialTrajectoryFromTriplet(const edm::EventSetup& es,
01338                                                                                          const TrackingRecHit* theInnerHit,
01339                                                                                          const TrackingRecHit* theMiddleHit,
01340                                                                                          const TrackingRecHit* theOuterHit)
01341 {
01342   FreeTrajectoryState fts;
01343 
01344           GlobalPoint inner = trackerGeom->idToDet(theInnerHit->geographicalId())->surface().toGlobal(theInnerHit->localPosition());
01345           GlobalPoint middle= trackerGeom->idToDet(theMiddleHit->geographicalId())->surface().toGlobal(theMiddleHit->localPosition());
01346           GlobalPoint outer = trackerGeom->idToDet(theOuterHit->geographicalId())->surface().toGlobal(theOuterHit->localPosition());
01347           
01348           LogDebug("RoadSearch") << "inner hit: r/phi/z = "<< inner.perp() << " " << inner.phi() << " " << inner.z() ;
01349           LogDebug("RoadSearch") << "middlehit: r/phi/z = "<< inner.perp() << " " << inner.phi() << " " << inner.z() ;
01350           LogDebug("RoadSearch") << "outer hit: r/phi/z = "<< outer.perp() << " " << outer.phi() << " " << outer.z() ;
01351           
01352           // hits should be reasonably separated in r
01353           const double dRmin = 0.1; // cm
01354           if (outer.perp() - inner.perp() < dRmin) return fts;
01355           const double dr2 = initialVertexErrorXY_*initialVertexErrorXY_;
01356           const double dz2 = 5.3*5.3;
01357 
01358           // linear z extrapolation of two hits have to be inside tracker ( |z| < 275 cm)
01359           FastLine linearFit(outer, inner);
01360           double z_0 = -linearFit.c()/linearFit.n2();
01361           if ( std::abs(z_0) > 275 && !CosmicReco_ ) return fts;
01362 
01363 
01364           FastHelix helix(outer, middle, inner, es);
01365           // check that helix is OK
01366           if (!helix.isValid() || 
01367               std::isnan(helix.stateAtVertex().parameters().momentum().perp())) return fts;
01368           // simple cuts on pt and dz
01369           if (helix.stateAtVertex().parameters().momentum().perp() < 0.5 ||
01370               std::abs(helix.stateAtVertex().parameters().position().z()) > 550.0)
01371             return fts;
01372 
01373           AlgebraicSymMatrix55 C = AlgebraicMatrixID();
01374           float zErr = dz2;
01375           float transverseErr = dr2; // assume equal cxx cyy
01376           C(3, 3) = transverseErr;
01377           C(4, 4) = zErr;
01378           CurvilinearTrajectoryError initialError(C);
01379 
01380 
01381           thePropagator = theAloPropagator;//GC
01382           GlobalVector gv=helix.stateAtVertex().parameters().momentum();
01383           float charge=helix.stateAtVertex().parameters().charge();
01384 
01385           if (CosmicReco_ && gv.y()>0){
01386             if (debug_) std::cout<<"Flipping direction!!!" << std::endl;
01387             thePropagator = theRevPropagator;
01388             gv=-1.*gv;
01389             charge=-1.*charge;
01390           }
01391 
01392           GlobalTrajectoryParameters Gtp(inner,gv,int(charge),&(*magField));
01393           fts = FreeTrajectoryState(Gtp, initialError);
01394 
01395          //fts = FreeTrajectoryState( helix.stateAtVertex().parameters(), initialError);
01396 
01397           return fts;
01398 }
01399 
01400 
01401 
01402 Trajectory RoadSearchTrackCandidateMakerAlgorithm::createSeedTrajectory(FreeTrajectoryState& fts,
01403                                                                         const TrackingRecHit* theInnerHit,
01404                                                                         const DetLayer* theInnerHitLayer)
01405 
01406 {
01407   Trajectory theSeedTrajectory;
01408 
01409   // Need to put the first hit on the trajectory
01410   const GeomDet* innerDet = trackerGeom->idToDet((theInnerHit)->geographicalId());
01411   const TrajectoryStateOnSurface innerState = 
01412     thePropagator->propagate(fts,innerDet->surface());
01413   if ( !innerState.isValid() ||
01414        std::isnan(innerState.globalMomentum().perp())) {
01415     if (debug_) std::cout<<"*******DISASTER ********* seed doesn't make it to first hit!!!!!" << std::endl;
01416     return theSeedTrajectory;
01417   }
01418   TransientTrackingRecHit::RecHitPointer intrhit = ttrhBuilder->build(theInnerHit);
01419   // if this first hit is a matched hit, it should be updated for the trajectory
01420   const SiStripMatchedRecHit2D *origHit = dynamic_cast<const SiStripMatchedRecHit2D *>(theInnerHit);
01421   if (origHit !=0){
01422     const GluedGeomDet *gdet = dynamic_cast<const GluedGeomDet*>(innerDet);
01423     const SiStripMatchedRecHit2D *corrHit = theHitMatcher->match(origHit,gdet,innerState.localDirection());
01424     if (corrHit!=0){
01425       intrhit = ttrhBuilder->build(&(*corrHit));
01426       delete corrHit;
01427     }
01428   }
01429   
01430   MeasurementEstimator::HitReturnType est = theEstimator->estimate(innerState, *intrhit);
01431   if (!est.first) return theSeedTrajectory;         
01432    TrajectoryStateOnSurface innerUpdated= theUpdator->update( innerState,*intrhit);                         
01433    if (debug_) std::cout<<"InnerUpdated: " << innerUpdated << std::endl;
01434   if (!innerUpdated.isValid() ||
01435        std::isnan(innerUpdated.globalMomentum().perp())) {
01436     if (debug_) std::cout<<"Trajectory updated with first hit is invalid!!!" << std::endl;
01437     return theSeedTrajectory;
01438   }
01439   TrajectoryMeasurement tm = TrajectoryMeasurement(innerState, innerUpdated, &(*intrhit),est.second,theInnerHitLayer);
01440   
01441   PTrajectoryStateOnDet pFirstStateTwo = trajectoryStateTransform::persistentState(innerUpdated,
01442                                                                           intrhit->geographicalId().rawId());
01443   edm::OwnVector<TrackingRecHit> newHitsTwo;
01444   newHitsTwo.push_back(intrhit->hit()->clone());
01445   
01446   TrajectorySeed tmpseedTwo = TrajectorySeed(pFirstStateTwo, 
01447                                              newHitsTwo,
01448                                              alongMomentum);
01449   if (thePropagator->propagationDirection()==oppositeToMomentum) {
01450     tmpseedTwo = TrajectorySeed(pFirstStateTwo, 
01451                                 newHitsTwo,
01452                                 oppositeToMomentum);
01453   }
01454 
01455   
01456   //Trajectory seedTraj(tmpseedTwo, alongMomentum);
01457   theSeedTrajectory = Trajectory(tmpseedTwo, tmpseedTwo.direction());
01458   
01459   theSeedTrajectory.push(tm,est.second);
01460   
01461   return theSeedTrajectory;
01462 }
01463 
01464 
01465 
01466 std::vector<Trajectory> RoadSearchTrackCandidateMakerAlgorithm::extrapolateTrajectory(const Trajectory& theTrajectory,
01467                                                                                       RoadSearchCloud::RecHitVector& theLayerHits,
01468                                                                                       const DetLayer* innerHitLayer,
01469                                                                                       const TrackingRecHit* outerHit,
01470                                                                                       const DetLayer* outerHitLayer)
01471 {
01472   std::vector<Trajectory> newTrajectories;
01473 
01474               for(RoadSearchCloud::RecHitVector::const_iterator ihit = theLayerHits.begin();
01475                   ihit != theLayerHits.end(); ihit++) {
01476                 Trajectory traj = theTrajectory;
01477                 const DetLayer* thisLayer =
01478                   theMeasurementTracker->geometricSearchTracker()->detLayer((*ihit)->geographicalId());
01479                 if (thisLayer == innerHitLayer){
01480                   // Right now we are assuming that ONLY single hit layers are in this initial collection
01481                   //if (thisLayer == innerHitLayer && !(ihit->recHit() == innerHit->recHit())){
01482                   //  if (debug_) std::cout<<"On inner hit layer, but have wrong hit?!?!?" << std::endl;
01483                   continue;
01484                 }
01485                 if (thisLayer == outerHitLayer){
01486                   LocalPoint p1 = (*ihit)->localPosition();
01487                   LocalPoint p2 = outerHit->localPosition();
01488                   if (p1.x()!=p2.x() || p1.y()!=p2.y()) continue;
01489                 }
01490                 // extrapolate
01491                 
01492                 TransientTrackingRecHit::RecHitPointer rhit = ttrhBuilder->build(*ihit);
01493                 
01494                 if (debug_){
01495                   if (rhit->isValid()) {
01496                     LogDebug("RoadSearch") << "RecHit " << ihit-theLayerHits.begin()
01497                                            << ", det " << rhit->det() << ", r/phi/z = "
01498                                            << rhit->globalPosition().perp() << " "
01499                                            << rhit->globalPosition().phi() << " "
01500                                            << rhit->globalPosition().z();
01501                   } else {
01502                     LogDebug("RoadSearch") << "RecHit " << ihit-theLayerHits.begin()
01503                                            << " (invalid)";
01504                   }
01505                 }
01506                 
01507                 const GeomDet* det = trackerGeom->idToDet(rhit->geographicalId());
01508                 
01509                 TrajectoryStateOnSurface predTsos;
01510                 TrajectoryStateOnSurface currTsos;
01511                 
01512                 if (traj.measurements().empty()) {
01513                   //predTsos = thePropagator->propagate(fts, det->surface());
01514                   if (debug_) std::cout<<"BIG ERROR!!! How did we make it to here with no trajectory measurements?!?!?"<<std::endl;
01515                 } else {
01516                   currTsos = traj.measurements().back().updatedState();
01517                   predTsos = thePropagator->propagate(currTsos, det->surface());
01518                 }
01519                 if (!predTsos.isValid()){
01520                   continue;
01521                 }
01522                 GlobalVector propagationDistance = predTsos.globalPosition() - currTsos.globalPosition();
01523                 if (propagationDistance.mag() > maxPropagationDistance) continue;
01524                 if (debug_) {
01525                   std::cout << "currTsos (x/y/z): " 
01526                             << currTsos.globalPosition().x() << " / "
01527                             << currTsos.globalPosition().y() << " / "
01528                             << currTsos.globalPosition().z() << std::endl;
01529                   std::cout << "predTsos (x/y/z): " 
01530                             << predTsos.globalPosition().x() << " / "
01531                             << predTsos.globalPosition().y() << " / "
01532                             << predTsos.globalPosition().z() << std::endl;
01533                   std::cout << "Propagation distance1 is " << propagationDistance.mag() << std::endl;
01534                 }
01535                 TrajectoryMeasurement tm;
01536                 if (debug_){
01537                   std::cout<< "trajectory at r/z=" <<  det->surface().position().perp() 
01538                            << "  " <<  det->surface().position().z() 
01539                            << ", hit " << ihit-theLayerHits.begin()
01540                            << " local prediction " << predTsos.localPosition().x() 
01541                            << " +- " << sqrt(predTsos.localError().positionError().xx()) 
01542                            << ", hit at " << rhit->localPosition().x() << " +- " << sqrt(rhit->localPositionError().xx())
01543                            << std::endl;
01544                 }
01545                 
01546                 // update
01547                 // first correct for angle
01548 
01549                 const SiStripMatchedRecHit2D *origHit = dynamic_cast<const SiStripMatchedRecHit2D *>(*ihit);
01550                 if (origHit !=0){
01551                   const GluedGeomDet *gdet = dynamic_cast<const GluedGeomDet*>(rhit->det());
01552                   const SiStripMatchedRecHit2D *corrHit = theHitMatcher->match(origHit,gdet,predTsos.localDirection());
01553                   if (corrHit!=0){
01554                     rhit = ttrhBuilder->build(&(*corrHit));
01555                     delete corrHit;
01556                   }
01557                 }
01558 
01559                 MeasurementEstimator::HitReturnType est = theEstimator->estimate(predTsos, *rhit);
01560                 if (debug_) std::cout << "estimation: " << est.first << " " << est.second << std::endl;
01561                 if (!est.first) continue;
01562                 currTsos = theUpdator->update(predTsos, *rhit);
01563                 tm = TrajectoryMeasurement(predTsos, currTsos, &(*rhit),est.second,thisLayer);
01564                 traj.push(tm,est.second);
01565                 newTrajectories.push_back(traj);
01566 
01567 
01568               }
01569 
01570             return newTrajectories;
01571 }
01572 
01573 
01574 TrackCandidateCollection RoadSearchTrackCandidateMakerAlgorithm::PrepareTrackCandidates(std::vector<Trajectory>& theTrajectories)
01575 {
01576 
01577   TrackCandidateCollection theCollection;
01578 
01579   theTrajectoryCleaner->clean(theTrajectories);
01580   
01581   //==========NEW CODE ==========
01582   
01583   if(CosmicTrackMerging_) {
01584     
01585     //generate vector of *valid* trajectories -> traj
01586     std::vector<Trajectory> traj;
01587 
01588     //keep track of trajectories which are used during merging
01589     std::vector<bool> trajUsed;
01590 
01591     for (std::vector<Trajectory>::iterator it = theTrajectories.begin(); it != theTrajectories.end(); ++it) {
01592       if (it->isValid()) {
01593         traj.push_back(*it);
01594         trajUsed.push_back(false);
01595       }
01596     }
01597     
01598     if(debugCosmics_) {
01599       std::cout << "==========ENTERING COSMIC MODE===========" << std::endl;
01600       //      int t=0;
01601       for (std::vector<Trajectory>::iterator it = traj.begin(); it != traj.end(); it++) {
01602         std::cout << "Trajectory " << it-traj.begin() << " has "<<it->recHits().size()<<" hits and is valid: " << it->isValid() << std::endl;
01603         TransientTrackingRecHit::ConstRecHitContainer itHits = it->recHits();
01604         
01605 
01606         for (TransientTrackingRecHit::ConstRecHitContainer::const_iterator rhit=itHits.begin(); rhit!=itHits.end(); ++rhit)
01607           std::cout << "-->good hit position: " << (*rhit)->globalPosition().x() << ", " 
01608                     << (*rhit)->globalPosition().y() << ", "<< (*rhit)->globalPosition().z() << std::endl;
01609 
01610       }
01611     }
01612 
01613     //double nested looop to find trajectories that match in phi
01614     for ( unsigned int i = 0; i < traj.size(); ++i) {
01615       if (trajUsed[i]) continue;    
01616       for ( unsigned int j = i+1; j != traj.size(); ++j) {
01617         if (trajUsed[j]) continue;    
01618         
01619         if (debugCosmics_) std::cout<< "Trajectory " <<i<< " has "<<traj[i].recHits().size()<<" hits with chi2=" << traj[i].chiSquared() << " and is valid"<<std::endl;
01620         if (debugCosmics_) std::cout<< "Trajectory " <<j<< " has "<<traj[j].recHits().size()<<" hits with chi2=" << traj[j].chiSquared() << " and is valid"<<std::endl;           
01621         
01622         TrajectoryMeasurement firstTraj1 = traj[i].firstMeasurement();
01623         TrajectoryMeasurement firstTraj2 = traj[j].firstMeasurement();
01624         TrajectoryStateOnSurface firstTraj1TSOS = firstTraj1.updatedState();
01625         TrajectoryStateOnSurface firstTraj2TSOS = firstTraj2.updatedState();
01626 
01627         
01628         if(debugCosmics_) 
01629           std::cout << "phi1: " << firstTraj1TSOS.globalMomentum().phi() 
01630                     << " phi2: " << firstTraj2TSOS.globalMomentum().phi() 
01631                     << " --> delta_phi: " << firstTraj1TSOS.globalMomentum().phi()-firstTraj2TSOS.globalMomentum().phi() << std::endl;
01632         
01633         //generate new trajectory if delta_phi<0.3
01634         //use phi of momentum vector associated to *innermost* hit of trajectories
01635         if( fabs(firstTraj1TSOS.globalMomentum().phi()-firstTraj2TSOS.globalMomentum().phi())<0.3 ) {
01636           if(debugCosmics_) std::cout << "-->match successful" << std::endl;
01637         } else {
01638           if(debugCosmics_) std::cout << "-->match not successful" << std::endl;
01639         }
01640         if( fabs(firstTraj1TSOS.globalMomentum().phi()-firstTraj2TSOS.globalMomentum().phi())>0.3 ) continue;
01641         
01642         
01643         //choose starting trajectory: use trajectory in lower hemisphere (with y<0) to start new combined trajectory
01644         //use y position of outermost hit
01645         TrajectoryMeasurement lastTraj1 = traj[i].lastMeasurement();
01646         TrajectoryMeasurement lastTraj2 = traj[j].lastMeasurement();
01647         TrajectoryStateOnSurface lastTraj1TSOS = lastTraj1.updatedState();
01648         TrajectoryStateOnSurface lastTraj2TSOS = lastTraj2.updatedState();
01649         
01650         if(debugCosmics_){
01651           std::cout<<"Traj1 first (x/y/z): " 
01652                    << firstTraj1TSOS.globalPosition().x() <<" / "
01653                    << firstTraj1TSOS.globalPosition().y() <<" / "
01654                    << firstTraj1TSOS.globalPosition().z() 
01655                    << "   phi: " << firstTraj1TSOS.globalMomentum().phi() << std::endl;
01656           std::cout<<"Traj1  last (x/y/z): " 
01657                    << lastTraj1TSOS.globalPosition().x() <<" / "
01658                    << lastTraj1TSOS.globalPosition().y() <<" / "
01659                    << lastTraj1TSOS.globalPosition().z() 
01660                    << "   phi: " << lastTraj1TSOS.globalMomentum().phi() << std::endl;
01661 
01662           std::cout<<"Traj2 first (x/y/z): " 
01663                    << firstTraj2TSOS.globalPosition().x() <<" / "
01664                    << firstTraj2TSOS.globalPosition().y() <<" / "
01665                    << firstTraj2TSOS.globalPosition().z()
01666                    << "   phi: " << firstTraj2TSOS.globalMomentum().phi() << std::endl;
01667           std::cout<<"Traj2  last (x/y/z): " 
01668                    << lastTraj2TSOS.globalPosition().x() <<" / "
01669                    << lastTraj2TSOS.globalPosition().y() <<" / "
01670                    << lastTraj2TSOS.globalPosition().z()
01671                    << "   phi: " << lastTraj2TSOS.globalMomentum().phi() << std::endl;
01672 
01673         }
01674 
01675         Trajectory *upperTrajectory, *lowerTrajectory;
01676         
01677         TrajectoryStateOnSurface lowerTSOS1,upperTSOS1;
01678         if (lastTraj1TSOS.globalPosition().y()<firstTraj1TSOS.globalPosition().y()) {
01679           lowerTSOS1=lastTraj1TSOS; upperTSOS1=firstTraj1TSOS;
01680         }
01681         else {
01682           lowerTSOS1=firstTraj1TSOS; upperTSOS1=lastTraj1TSOS;
01683         }
01684         TrajectoryStateOnSurface lowerTSOS2;
01685         if (lastTraj2TSOS.globalPosition().y()<firstTraj2TSOS.globalPosition().y()) lowerTSOS2=lastTraj2TSOS;
01686         else lowerTSOS2=firstTraj2TSOS;
01687         if(lowerTSOS1.globalPosition().y() > lowerTSOS2.globalPosition().y()) {
01688           if(debugCosmics_) 
01689             std::cout << "-->case A: "<< lowerTSOS1.globalPosition().y() << " > " << lowerTSOS2.globalPosition().y() << std::endl;
01690           
01691           upperTrajectory = &(traj[i]);
01692           lowerTrajectory = &(traj[j]);
01693           
01694         } else {
01695           if(debugCosmics_) 
01696             std::cout << "-->case B: "<< lowerTSOS1.globalPosition().y() << " < " << lowerTSOS2.globalPosition().y() << std::endl;
01697           
01698           upperTrajectory = &(traj[j]);
01699           lowerTrajectory = &(traj[i]);
01700         } 
01701         
01702         std::vector<Trajectory> freshStartUpperTrajectory = theSmoother->trajectories(*upperTrajectory);
01703         std::vector<Trajectory> freshStartLowerTrajectory = theSmoother->trajectories(*lowerTrajectory);
01704         //--JR
01705         if (freshStartUpperTrajectory.empty() || freshStartLowerTrajectory .empty()){
01706           if (debugCosmics_) std::cout << " the smoother has failed."<<std::endl;
01707           continue;
01708         }
01709         //--JR
01710         TrajectoryStateOnSurface NewFirstTsos = freshStartUpperTrajectory.begin()->lastMeasurement().updatedState();
01711         TrajectoryStateOnSurface forwardTsos  = freshStartUpperTrajectory.begin()->firstMeasurement().forwardPredictedState();
01712         TrajectoryStateOnSurface backwardTsos = freshStartUpperTrajectory.begin()->lastMeasurement().backwardPredictedState();
01713 
01714         Trajectory freshStartTrajectory = *freshStartUpperTrajectory.begin();
01715         if(debugCosmics_) std::cout << "seed hit updatedState: " << NewFirstTsos.globalMomentum().x() << ", " << NewFirstTsos.globalMomentum().y() << ", " << NewFirstTsos.globalMomentum().z()  <<  std::endl;
01716         if(debugCosmics_) std::cout << "seed hit updatedState (pos x/y/z): " << NewFirstTsos.globalPosition().x() << ", " << NewFirstTsos.globalPosition().y() << ", " << NewFirstTsos.globalPosition().z()  <<  std::endl;
01717         if(debugCosmics_) std::cout << "seed hit forwardPredictedState: " << forwardTsos.globalMomentum().x() << ", " << forwardTsos.globalMomentum().y() << ", " << forwardTsos.globalMomentum().z()  <<  std::endl;
01718         if(debugCosmics_) std::cout << "seed hit forwardPredictedState (pos x/y/z): " << forwardTsos.globalPosition().x() << ", " << forwardTsos.globalPosition().y() << ", " << forwardTsos.globalPosition().z()  <<  std::endl;
01719         if(debugCosmics_) std::cout << "seed hit backwardPredictedState: " << backwardTsos.globalMomentum().x() << ", " << backwardTsos.globalMomentum().y() << ", " << backwardTsos.globalMomentum().z() <<  std::endl;
01720         if(debugCosmics_) std::cout << "seed hit backwardPredictedState (pos x/y/z): " << backwardTsos.globalPosition().x() << ", " << backwardTsos.globalPosition().y() << ", " << backwardTsos.globalPosition().z() <<  std::endl;
01721         
01722         if(debugCosmics_) std::cout<<"#hits for upper trajectory: " << freshStartTrajectory.measurements().size() << std::endl;
01723         
01724         //loop over hits in upper trajectory and add them to lower trajectory
01725         TransientTrackingRecHit::ConstRecHitContainer ttHits = lowerTrajectory->recHits(splitMatchedHits_);
01726         
01727         if(debugCosmics_) std::cout << "loop over hits in lower trajectory..." << std::endl;
01728         
01729         bool addHitToFreshStartTrajectory = false;
01730         bool propagationFailed = false;
01731         int lostHits = 0;
01732         for (TransientTrackingRecHit::ConstRecHitContainer::const_iterator rhit=ttHits.begin(); rhit!=ttHits.end(); ++rhit){
01733 
01734           if(debugCosmics_ && lostHits>0){
01735             std::cout << " Lost " << lostHits << " of " << ttHits.size() << " on lower trajectory " << std::endl;
01736             std::cout << " Lost " << ((float)lostHits/(float)ttHits.size()) << " of hits of on lower trajectory " << std::endl;
01737           }
01738           if ((float)lostHits/(float)ttHits.size() > 0.5) {
01739               propagationFailed = true;
01740               break;
01741           }
01742           if(debugCosmics_) std::cout << "-->hit position: " << (*rhit)->globalPosition().x() << ", " << (*rhit)->globalPosition().y() << ", "<< (*rhit)->globalPosition().z() << std::endl;
01743           
01744           TrajectoryStateOnSurface predTsos;
01745           TrajectoryStateOnSurface currTsos;
01746           TrajectoryMeasurement tm;
01747           
01748           TransientTrackingRecHit::ConstRecHitPointer rh = (*rhit);
01749 
01750 
01751 
01752           /*
01753           if( rh->isValid() ) { 
01754             if(debugCosmics_) std::cout << "-->hit is valid"<<std::endl;
01755             const GeomDet* det = trackerGeom->idToDet(rh->geographicalId());
01756             
01757             std::vector<TrajectoryMeasurement> measL = freshStartTrajectory.measurements();
01758             bool alreadyUsed = false;         
01759             for (std::vector<TrajectoryMeasurement>::iterator mh=measL.begin();mh!=measL.end();++mh) {
01760               if (rh->geographicalId().rawId()==mh->recHit()->geographicalId().rawId()) {
01761                 if (debugCosmics_) std::cout << "this hit is already in the trajectory, skip it" << std::endl;
01762                 alreadyUsed = true;
01763                 break;
01764               }
01765             }
01766             if (alreadyUsed) continue;
01767             //std::vector<TrajectoryMeasurement> measU = freshStartUpperTrajectory[0].measurements();
01768             if (freshStartTrajectory.direction()==0) {
01769               std::vector<TrajectoryMeasurement>::iterator ml;
01770               for (ml=measL.begin();ml!=measL.end();++ml) {
01771                 if (debugCosmics_)  std::cout << "hit y="<<ml->recHit()->globalPosition().y()
01772                                               << " tsos validity fwd="<<ml->forwardPredictedState().isValid() 
01773                                               << " bwd="<<ml->backwardPredictedState().isValid() 
01774                                               << " upd="<<ml->updatedState().isValid() 
01775                                               <<std::endl;
01776                 if (ml->recHit()->globalPosition().y()>(*rhit)->globalPosition().y() && ml!=measL.begin()) {
01777                   break;
01778                 }
01779               }
01780               if ((ml-1)->forwardPredictedState().isValid()) currTsos = (ml-1)->forwardPredictedState();
01781               else currTsos = (ml-1)->backwardPredictedState();
01782               
01783               if (debugCosmics_) std::cout << "currTsos y=" << currTsos.globalPosition().y() << std::endl;
01784             }
01785             else {
01786               std::vector<TrajectoryMeasurement>::reverse_iterator ml;
01787               for (ml=measL.rbegin();ml!=measL.rend();++ml) {
01788                 if (debugCosmics_) std::cout << "hit y="<<ml->recHit()->globalPosition().y()
01789                                              << " tsos validity fwd="<<ml->forwardPredictedState().isValid() 
01790                                              << " bwd="<<ml->backwardPredictedState().isValid() 
01791                                              << " upd="<<ml->updatedState().isValid() 
01792                                              <<std::endl;
01793                 if (ml->recHit()->globalPosition().y()>(*rhit)->globalPosition().y() && ml!=measL.rbegin()) {
01794                   break;
01795                 }
01796               }
01797               if ((ml-1)->forwardPredictedState().isValid()) {
01798                 currTsos = (ml-1)->forwardPredictedState();
01799               }
01800               else {
01801                 currTsos = (ml-1)->backwardPredictedState();
01802               }
01803               
01804               if (debugCosmics_) std::cout << "reverse. currTsos y=" << currTsos.globalPosition().y() << std::endl;
01805             }
01806             
01807             
01808           }
01809           */
01810 
01811 
01812           if( rh->isValid() ) { 
01813             if(debugCosmics_) std::cout << "-->hit is valid"<<std::endl;
01814             const GeomDet* det = trackerGeom->idToDet(rh->geographicalId());
01815             if( addHitToFreshStartTrajectory==false ) {
01816               //first hit from upper trajectory that is being added to lower trajectory requires usage of backwardPredictedState (of lower trajectory)
01817               currTsos = freshStartTrajectory.lastMeasurement().backwardPredictedState();
01818             } else {
01819               //remaining hits from upper trajectory that are being added to lower trajectory require usage of forwardPredictedState
01820               currTsos = freshStartTrajectory.lastMeasurement().forwardPredictedState();
01821             }
01822             
01823             if(debugCosmics_) std::cout << "current TSOS: " << currTsos.globalPosition().x() << ", " << currTsos.globalPosition().y() << ", " << currTsos.globalPosition().z() << ", " << std::endl;
01824             
01825             predTsos = theAloPropagator->propagate(currTsos, det->surface());
01826             
01827             if (!predTsos.isValid()) {
01828               if(debugCosmics_) std::cout<<"predTsos is not valid!" <<std::endl;
01829               //propagationFailed = true;
01830               ++lostHits;
01831               //break;
01832               continue;
01833             }
01834             GlobalVector propagationDistance = predTsos.globalPosition() - currTsos.globalPosition();
01835             if (propagationDistance.mag() > maxPropagationDistance) continue;
01836             
01837             if(debugCosmics_) std::cout << "predicted TSOS: " << predTsos.globalPosition().x() << ", " << predTsos.globalPosition().y() << ", " << predTsos.globalPosition().z() << ", " << std::endl;
01838             MeasurementEstimator::HitReturnType est = theEstimator->estimate(predTsos, *rh);
01839             if (!est.first) {
01840               if(debugCosmics_) std::cout<<"Failed to add one of the original hits on a low occupancy layer!!!!" << std::endl;
01841               //propagationFailed = true;
01842               ++lostHits;
01843               //break;
01844               continue;
01845             }
01846             
01847             currTsos = theUpdator->update(predTsos, *rh);
01848             if(debugCosmics_) std::cout << "current updated TSOS: " << currTsos.globalPosition().x() << ", " << currTsos.globalPosition().y() << ", " << currTsos.globalPosition().z() << ", " << std::endl;
01849             tm = TrajectoryMeasurement(predTsos, currTsos,&(*rh),est.second,theMeasurementTracker->geometricSearchTracker()->detLayer(rh->geographicalId()));
01850             freshStartTrajectory.push(tm,est.second);
01851             addHitToFreshStartTrajectory=true;
01852             
01853           }
01854 
01855           if(debugCosmics_) std::cout<<"#hits for new trajectory (his from upper trajectory added): " << freshStartTrajectory.measurements().size() << std::endl;
01856         }
01857 
01858         if (propagationFailed) {
01859           if (debugCosmics_) std::cout<<"Propagation failed so go to next trajectory" << std::endl;
01860           continue;
01861         }
01862 
01863         //put final trajectory together
01864         if(debugCosmics_) std::cout << "put final trajectory together..." << std::endl;
01865         edm::OwnVector<TrackingRecHit> goodHits;
01866         TransientTrackingRecHit::ConstRecHitContainer tttempHits = freshStartTrajectory.recHits(splitMatchedHits_);
01867         
01868         for (int k=tttempHits.size()-1; k>=0; k--) {
01869           if(debugCosmics_) std::cout << "-->good hit position: " << tttempHits[k]->globalPosition().x() << ", " << tttempHits[k]->globalPosition().y() << ", "<< tttempHits[k]->globalPosition().z() << std::endl;
01870           goodHits.push_back(tttempHits[k]->hit()->clone());
01871         }
01872         TrajectoryStateOnSurface firstState;
01873         
01874         // check if Trajectory from seed is on first hit of the cloud, if not, propagate
01875         // exclude if first state on first hit is not valid
01876         DetId FirstHitId = (*(freshStartTrajectory.recHits().end()-1))->geographicalId(); //was begin
01877         
01878         TrajectoryMeasurement maxYMeasurement = freshStartTrajectory.lastMeasurement();
01879         const GeomDet* det = trackerGeom->idToDet(FirstHitId);
01880         firstState = theAnalyticalPropagator->propagate(maxYMeasurement.updatedState(),det->surface());
01881         if (firstState.isValid() == false) continue;    
01882         PTrajectoryStateOnDet const & state = trajectoryStateTransform::persistentState(firstState,FirstHitId.rawId());
01883         
01884         //generate new trajectory seed
01885         TrajectoryStateOnSurface firstTSOS = freshStartTrajectory.lastMeasurement().updatedState();
01886         if(debugCosmics_) std::cout << "generate new trajectory seed with hit (x/y/z): " << firstTSOS.globalPosition().x() << ", " << firstTSOS.globalPosition().y() << ", " << firstTSOS.globalPosition().z() << ", " << std::endl;
01887         TransientTrackingRecHit::ConstRecHitPointer rhit = freshStartTrajectory.lastMeasurement().recHit();
01888         PTrajectoryStateOnDet const & pFirstState = trajectoryStateTransform::persistentState(NewFirstTsos,rhit->geographicalId().rawId());
01889         edm::OwnVector<TrackingRecHit> newHits;
01890         newHits.push_back(rhit->hit()->clone());
01891         TrajectorySeed tmpseed = TrajectorySeed(pFirstState,newHits,alongMomentum);
01892         
01893         theCollection.push_back(TrackCandidate(goodHits,freshStartTrajectory.seed(),state));
01894         
01895         //trajectory usage
01896         trajUsed[i]=true;
01897         trajUsed[j]=true;
01898         
01899       } //for loop trajectory2
01900       
01901     } //for loop trajectory1
01902 
01903     //add all trajectories to the resulting vector if they have *not* been used by the trajectory merging algorithm
01904     for ( unsigned int i = 0; i < traj.size(); ++i) {
01905       
01906       if (trajUsed[i]==true) continue;
01907 
01908       if (debugCosmics_) std::cout<< "Trajectory (not merged) has "<<traj[i].recHits().size()<<" hits with chi2=" << traj[i].chiSquared() << " and is valid? "<< traj[i].isValid()<<std::endl;
01909       edm::OwnVector<TrackingRecHit> goodHits;
01910       TransientTrackingRecHit::ConstRecHitContainer ttHits = traj[i].recHits(splitMatchedHits_);
01911       for (TransientTrackingRecHit::ConstRecHitContainer::const_iterator rhit=ttHits.begin(); rhit!=ttHits.end(); ++rhit){
01912         goodHits.push_back((*rhit)->hit()->clone());
01913       }
01914       TrajectoryStateOnSurface firstState;
01915       
01916       // check if Trajectory from seed is on first hit of the cloud, if not, propagate
01917       // exclude if first state on first hit is not valid
01918       DetId FirstHitId = (*(traj[i].recHits().begin()))->geographicalId();
01919       
01920       // propagate back to first hit    
01921       TrajectoryMeasurement firstMeasurement = traj[i].measurements()[0];
01922       const GeomDet* det = trackerGeom->idToDet(FirstHitId);
01923       firstState = theAnalyticalPropagator->propagate(firstMeasurement.updatedState(), det->surface());   
01924       if (firstState.isValid()) {
01925         PTrajectoryStateOnDet state = trajectoryStateTransform::persistentState(firstState,FirstHitId.rawId());
01926         theCollection.push_back(TrackCandidate(goodHits,traj[i].seed(),state));
01927       }
01928     }
01929     if (debugCosmics_) std::cout << "Original collection had " << theTrajectories.size() 
01930                                  << " candidates.  Merged collection has " << theCollection.size() << std::endl;
01931   } //if(CosmicTrackMerging_)
01932   
01933   
01934   if(!CosmicTrackMerging_) {
01935      for (std::vector<Trajectory>::const_iterator it = theTrajectories.begin(); it != theTrajectories.end(); it++) {
01936         if (debug_) std::cout<< " Trajectory has "<<it->recHits().size()<<" hits with chi2=" << it->chiSquared() << " and is valid? "<<it->isValid()<<std::endl;
01937         if (it->isValid()){
01938 
01939            edm::OwnVector<TrackingRecHit> goodHits;
01940            TransientTrackingRecHit::ConstRecHitContainer ttHits = it->recHits(splitMatchedHits_);
01941            for (TransientTrackingRecHit::ConstRecHitContainer::const_iterator rhit=ttHits.begin(); rhit!=ttHits.end(); ++rhit){
01942               goodHits.push_back((*rhit)->hit()->clone());
01943            }
01944            TrajectoryStateOnSurface firstState;
01945 
01946            // check if Trajectory from seed is on first hit of the cloud, if not, propagate
01947            // exclude if first state on first hit is not valid
01948            DetId FirstHitId = (*(it->recHits().begin()))->geographicalId();
01949 
01950            // propagate back to first hit    
01951            TrajectoryMeasurement firstMeasurement = it->measurements()[0];
01952            const GeomDet* det = trackerGeom->idToDet(FirstHitId);
01953            firstState = theAnalyticalPropagator->propagate(firstMeasurement.updatedState(), det->surface());      
01954            if (firstState.isValid() == false) continue;    
01955            PTrajectoryStateOnDet state = trajectoryStateTransform::persistentState(firstState,FirstHitId.rawId());
01956            theCollection.push_back(TrackCandidate(goodHits,it->seed(),state));
01957         }
01958      }
01959   }
01960 
01961   return theCollection;
01962 }