/data/doxygen/doxygen-1.7.3/gen/CMSSW_4_2_8/src/CalibTracker/SiStripAPVAnalysis/src/ApvAnalysisFactory.cc

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#include "CalibTracker/SiStripAPVAnalysis/interface/ApvAnalysisFactory.h"
//#include "DataFormats/SiStripCommon/interface/SiStripConstants.h"

#include "CalibTracker/SiStripAPVAnalysis/interface/TT6NTPedestalCalculator.h"

using namespace std;
ApvAnalysisFactory::ApvAnalysisFactory(string theAlgorithmType, int theNumCMstripsInGroup, int theMaskCalcFlag, float theMaskNoiseCut,
         float theMaskDeadCut,
         float theMaskTruncCut,
         float theCutToAvoidSignal,
         int  theEventInitNumber,
         int theEventIterNumber){

  theAlgorithmType_ =  theAlgorithmType;
  theNumCMstripsInGroup_ = theNumCMstripsInGroup;
  theMaskCalcFlag_ =  theMaskCalcFlag;
  theMaskNoiseCut_ =  theMaskNoiseCut;
  theMaskDeadCut_ =   theMaskDeadCut;
  theMaskTruncCut_ =  theMaskTruncCut;
  theCutToAvoidSignal_ =   theCutToAvoidSignal;
  theEventInitNumber_ =   theEventInitNumber;
  theEventIterNumber_ =  theEventIterNumber;

}

ApvAnalysisFactory::ApvAnalysisFactory(const edm::ParameterSet& pset){

  theCMType_ = pset.getParameter<string>("CMType");
  useDB_ = pset.getParameter<bool>("useDB");
  
  theAlgorithmType_ = pset.getParameter<string>("CalculatorAlgorithm");
  theNumCMstripsInGroup_ = pset.getParameter<int>("NumCMstripsInGroup");
  theMaskCalcFlag_ = pset.getParameter<int>("MaskCalculationFlag");
  
  theMaskNoiseCut_ = pset.getParameter<double>("MaskNoiseCut");
  theMaskDeadCut_ =  pset.getParameter<double>("MaskDeadCut");
  theMaskTruncCut_  = pset.getParameter<double>("MaskTruncationCut");
  theCutToAvoidSignal_ = pset.getParameter<double>("CutToAvoidSignal");
  
  theEventInitNumber_ =  pset.getParameter<int>("NumberOfEventsForInit");
  theEventIterNumber_ = pset.getParameter<int>("NumberOfEventsForIteration");
  apvMap_.clear();

 
}
//----------------------------------
ApvAnalysisFactory::~ApvAnalysisFactory(){
  ApvAnalysisFactory::ApvAnalysisMap::iterator it = apvMap_.begin();
  for(;it!=apvMap_.end();it++)
    {
      vector<ApvAnalysis*>::iterator myApv = (*it).second.begin();
      for(;myApv!=(*it).second.end();myApv++)
  deleteApv(*myApv);
    }
  apvMap_.clear();
}

//----------------------------------

bool ApvAnalysisFactory::instantiateApvs(uint32_t detId, int numberOfApvs){


  ApvAnalysisFactory::ApvAnalysisMap::iterator CPos = apvMap_.find(detId);
  if(CPos != apvMap_.end()) { 
    cout << " APVs for Detector Id " << detId << " already created !!!" << endl;;
    return false;
  }
  vector< ApvAnalysis* > temp;
  for(int i=0;i<numberOfApvs;i++)
    {
      ApvAnalysis* apvTmp = new ApvAnalysis(theEventIterNumber_);
      //      constructAuxiliaryApvClasses(apvTmp); 
      constructAuxiliaryApvClasses(apvTmp,detId,i); 
      temp.push_back(apvTmp);
    }
  apvMap_.insert(pair< uint32_t, vector< ApvAnalysis* > >(detId, temp));
   return true;  
}

std::vector<ApvAnalysis *> ApvAnalysisFactory::getApvAnalysis( const uint32_t nDET_ID)
{
  ApvAnalysisMap::const_iterator _apvAnalysisIter = apvMap_.find( nDET_ID);

  return apvMap_.end() != _apvAnalysisIter ? _apvAnalysisIter->second : std::vector<ApvAnalysis *>();
}

void ApvAnalysisFactory::constructAuxiliaryApvClasses( ApvAnalysis* theAPV, 
                                                       uint32_t detId, 
                                                       int thisApv )
{
  //----------------------------------------------------------------
  // Create the ped/noise/CMN calculators, zero suppressors etc.
  // (Is called by addDetUnitAndConstructApvs()).
  //
  // N.B. Don't call this twice for the same APV!
  //-----------------------------------------------------------------
  // cout<<"VirtualApvAnalysisFactory::constructAuxiliaryApvClasses"<<endl;
  TkPedestalCalculator*   thePedestal =0;
  TkNoiseCalculator*      theNoise=0;
  TkApvMask*              theMask=0;
  TkCommonModeCalculator* theCM=0;

  TkCommonMode*   theCommonMode = new TkCommonMode();
  TkCommonModeTopology* theTopology = new TkCommonModeTopology(128, theNumCMstripsInGroup_);
  theCommonMode->setTopology(theTopology);

  // Create desired algorithms.
  if( theAlgorithmType_ == "TT6") {
    theMask = new TT6ApvMask(theMaskCalcFlag_,theMaskNoiseCut_,theMaskDeadCut_,theMaskTruncCut_); 
    theNoise = new TT6NoiseCalculator(theEventInitNumber_, theEventIterNumber_, theCutToAvoidSignal_); 
    thePedestal = new TT6PedestalCalculator(theEventInitNumber_, theEventIterNumber_, theCutToAvoidSignal_);
    theCM = new TT6CommonModeCalculator (theNoise, theMask, theCutToAvoidSignal_);
  } else if( "TT6NT" == theAlgorithmType_) {
    theMask = new TT6ApvMask( theMaskCalcFlag_,
                              theMaskNoiseCut_,
                              theMaskDeadCut_,
                              theMaskTruncCut_); 
    theNoise = new TT6NoiseCalculator( theEventInitNumber_, 
                                       theEventIterNumber_, 
                                       theCutToAvoidSignal_); 
    thePedestal = new TT6NTPedestalCalculator;
    theCM = new TT6CommonModeCalculator( theNoise, 
                                         theMask, 
                                         theCutToAvoidSignal_);
  } else if (theAlgorithmType_ == "MIX") {
    // the mask as to be defined also for SimplePedCalculator
    theMask = new TT6ApvMask(theMaskCalcFlag_,theMaskNoiseCut_,theMaskDeadCut_,theMaskTruncCut_); 

    thePedestal = new SimplePedestalCalculator(theEventInitNumber_);

    theNoise = new SimpleNoiseCalculator(theEventInitNumber_, useDB_); 

    if (theCMType_ == "Median"){
      theCM = new MedianCommonModeCalculator ();
    } else {
      cout << "Sorry Only Median is available for now, Mean and FastLinear are coming soon" << endl;
    }
  }


  if(theCommonMode)
    theCM->setCM(theCommonMode);
  if(thePedestal)
    theAPV->setPedestalCalculator(*thePedestal);
  if(theNoise)
    theAPV->setNoiseCalculator(*theNoise);
  if(theMask)
    theAPV->setMask(*theMask);
  if(theCM)
    theAPV->setCommonModeCalculator(*theCM);



}


void ApvAnalysisFactory::updatePair(uint32_t detId, int pairNumber, const edm::DetSet<SiStripRawDigi>& in)
{
  map<uint32_t, vector<ApvAnalysis*> >::const_iterator apvAnalysisIt = apvMap_.find(detId);
  if(apvAnalysisIt != apvMap_.end())
    {
      int iter=0;

      for(vector<ApvAnalysis*>::const_iterator apvIt = (apvAnalysisIt->second).begin(); apvIt != (apvAnalysisIt->second).end(); apvIt++)
  {

    if (iter==pairNumber*2 || iter==(2*pairNumber+1)){
      
      //      cout << "ApvAnalysisFactory::updatePair pair number " << pairNumber << endl;
      //      cout << "ApvAnlysis will be updated for the apv # " << iter << endl;

      edm::DetSet<SiStripRawDigi> tmpRawDigi;
      tmpRawDigi.data.reserve(128);

      int startStrip = 128*(iter%2);
      int stopStrip = startStrip + 128;
 
      for( int istrip = startStrip; istrip < stopStrip;istrip++)
      {
        if( static_cast<int>( in.data.size()) <= istrip) tmpRawDigi.data.push_back( 0);
        else tmpRawDigi.data.push_back(in.data[istrip]); //maybe dangerous
      }
      
      (*apvIt)->newEvent();
      (*apvIt)->updateCalibration(tmpRawDigi);
      
    }

    iter++;
  }
    }
  
}// void





void ApvAnalysisFactory::update(uint32_t detId, const edm::DetSet<SiStripRawDigi>& in)
{
  map<uint32_t, vector<ApvAnalysis*> >::const_iterator apvAnalysisIt = apvMap_.find(detId);
  if(apvAnalysisIt != apvMap_.end())
    {
      int i=0;
       for(vector<ApvAnalysis*>::const_iterator apvIt = (apvAnalysisIt->second).begin(); apvIt != (apvAnalysisIt->second).end(); apvIt++)
   {
     edm::DetSet<SiStripRawDigi> tmpRawDigi;
     //it is missing the detId ...
     tmpRawDigi.data.reserve(128);
     int startStrip = 128*i;
     int stopStrip = startStrip + 128;
     
     for( int istrip = startStrip; istrip < stopStrip;istrip++)
     {
       if( static_cast<int>( in.data.size()) <= istrip) tmpRawDigi.data.push_back(0);
       else tmpRawDigi.data.push_back(in.data[istrip]); //maybe dangerous
     }

     (*apvIt)->newEvent();
     (*apvIt)->updateCalibration(tmpRawDigi);
     i++;
   }
    }
  
}



void ApvAnalysisFactory::getPedestal(uint32_t detId, int apvNumber, ApvAnalysis::PedestalType& peds)
{
  //Get the pedestal for a given apv
  peds.clear();
  map<uint32_t, vector<ApvAnalysis*> >::const_iterator apvAnalysisIt = apvMap_.find(detId);
  if(apvAnalysisIt != apvMap_.end())
    {
      vector<ApvAnalysis*> myApvs = apvAnalysisIt->second;
      peds = myApvs[apvNumber]->pedestalCalculator().pedestal();

    }  
}

void ApvAnalysisFactory::getPedestal(uint32_t detId, ApvAnalysis::PedestalType& peds)
{
  //Get the pedestal for a given apv
  peds.clear();
  map<uint32_t, vector<ApvAnalysis*> >::const_iterator apvAnalysisIt = apvMap_.find(detId);
  if(apvAnalysisIt != apvMap_.end())
    {
      vector<ApvAnalysis* > theApvs = apvAnalysisIt->second;
      for(vector<ApvAnalysis*>::const_iterator it = theApvs.begin(); it != theApvs.end();it++)
  {
    ApvAnalysis::PedestalType tmp = (*it)->pedestalCalculator().pedestal();
    for(ApvAnalysis::PedestalType::const_iterator pit =tmp.begin(); pit!=tmp.end(); pit++) 
      peds.push_back(*pit);
  }
    }
}
float ApvAnalysisFactory::getStripPedestal(uint32_t detId, int stripNumber)
{
  //Get the pedestal for a given apv
  ApvAnalysis::PedestalType temp;
  int apvNumb = int(stripNumber / 128.); 
  int stripN = (stripNumber - apvNumb*128);
  
  getPedestal(detId, apvNumb, temp);
  return temp[stripN];

}
 void ApvAnalysisFactory::getNoise(uint32_t detId, int apvNumber, ApvAnalysis::PedestalType& noise)
{
  //Get the pedestal for a given apv
  noise.clear();
  map<uint32_t, vector<ApvAnalysis*> >::const_iterator apvAnalysisIt = apvMap_.find(detId);
  if(apvAnalysisIt != apvMap_.end())
    {
      vector<ApvAnalysis* > theApvs = apvAnalysisIt->second;

      noise = theApvs[apvNumber]->noiseCalculator().noise();
    }
}

float ApvAnalysisFactory::getStripNoise(uint32_t detId, int stripNumber)
{
  //Get the pedestal for a given apv
  ApvAnalysis::PedestalType temp;
  int apvNumb = int(stripNumber / 128.); 
  int stripN = (stripNumber - apvNumb*128);
  
  getNoise(detId, apvNumb, temp);
  return temp[stripN];

}

void ApvAnalysisFactory::getNoise(uint32_t detId, ApvAnalysis::PedestalType& peds)
{
  //Get the pedestal for a given apv
  peds.clear();
  map<uint32_t, vector<ApvAnalysis* > >::const_iterator theApvs_map =  apvMap_.find(detId);
  if(theApvs_map != apvMap_.end())
    {
      vector<ApvAnalysis*>::const_iterator theApvs = (theApvs_map->second).begin();
      for(; theApvs !=  (theApvs_map->second).end();theApvs++)
  {
    ApvAnalysis::PedestalType tmp = (*theApvs)->noiseCalculator().noise();
    for(ApvAnalysis::PedestalType::const_iterator pit =tmp.begin(); pit!=tmp.end(); pit++) 
      peds.push_back(*pit);
  }
    }
}


 void ApvAnalysisFactory::getRawNoise(uint32_t detId, int apvNumber, ApvAnalysis::PedestalType& noise)
{
  //Get the pedestal for a given apv
  noise.clear();
  map<uint32_t, vector<ApvAnalysis*> >::const_iterator apvAnalysisIt = apvMap_.find(detId);
  if(apvAnalysisIt != apvMap_.end())
    {
      vector<ApvAnalysis* > theApvs = apvAnalysisIt->second;

      noise = theApvs[apvNumber]->pedestalCalculator().rawNoise();
    }
}

float ApvAnalysisFactory::getStripRawNoise(uint32_t detId, int stripNumber)
{
  //Get the pedestal for a given apv
  ApvAnalysis::PedestalType temp;
  int apvNumb = int(stripNumber / 128.); 
  int stripN = (stripNumber - apvNumb*128);
  
  getRawNoise(detId, apvNumb, temp);
  return temp[stripN];

}

void ApvAnalysisFactory::getRawNoise(uint32_t detId, ApvAnalysis::PedestalType& peds)
{
  //Get the pedestal for a given apv
  peds.clear();
  map<uint32_t, vector<ApvAnalysis* > >::const_iterator theApvs_map =  apvMap_.find(detId);
  if(theApvs_map != apvMap_.end())
    {
      vector<ApvAnalysis*>::const_iterator theApvs = (theApvs_map->second).begin();
      for(; theApvs !=  (theApvs_map->second).end();theApvs++)
  {
    ApvAnalysis::PedestalType tmp = (*theApvs)->pedestalCalculator().rawNoise();
    for(ApvAnalysis::PedestalType::const_iterator pit =tmp.begin(); pit!=tmp.end(); pit++) 
      peds.push_back(*pit);
  }
    }
}



vector<float> ApvAnalysisFactory::getCommonMode(uint32_t detId, int apvNumber)
{
  vector<float> tmp;
  tmp.clear();
  map<uint32_t, vector<ApvAnalysis* > >::const_iterator theApvs_map =  apvMap_.find(detId);
  if(theApvs_map != apvMap_.end())
    {
      vector<ApvAnalysis* > theApvs = theApvs_map->second;
      
      tmp = theApvs[apvNumber]->commonModeCalculator().commonMode()->returnAsVector();
    }
  return tmp;
}
void ApvAnalysisFactory::getCommonMode(uint32_t detId,ApvAnalysis::PedestalType& tmp)
{

  map<uint32_t, vector<ApvAnalysis*> >::const_iterator apvAnalysisIt = apvMap_.find(detId);
  if(apvAnalysisIt != apvMap_.end())
  {
    vector<ApvAnalysis* > theApvs = apvAnalysisIt->second;
    for( unsigned int i=0; i< theApvs.size(); i++)
    {
      //To be fixed. We return only the first one in the vector.
      vector<float> tmp_cm = theApvs[i]->commonModeCalculator().commonMode()->returnAsVector();
      for( unsigned int it = 0; it < tmp_cm.size(); it++)
        tmp.push_back( tmp_cm[it]);
    }
  }
}

void ApvAnalysisFactory::getMask(uint32_t det_id, TkApvMask::MaskType& tmp)
{
  
  map<uint32_t, vector<ApvAnalysis*> >::const_iterator apvAnalysisIt = apvMap_.find(det_id);
  if(apvAnalysisIt != apvMap_.end()) {
    vector<ApvAnalysis* > theApvs = apvAnalysisIt->second;
    for( unsigned int i=0; i< theApvs.size(); i++)
    {
      TkApvMask::MaskType theMaskType = ( theApvs[i]->mask()).mask();
      //cout <<"theMaskType size "<<theMaskType.size()<<endl;
          
      for( unsigned int ii=0;ii<theMaskType.size();ii++)
      {
        tmp.push_back(theMaskType[ii]);
        //cout <<"The Value "<<theMaskType[ii]<<" "<<ii<<endl;
      }
    }
  }
}
bool ApvAnalysisFactory::isUpdating(uint32_t detId)
{
  bool updating = true;
  map<uint32_t, vector<ApvAnalysis*> >::const_iterator apvAnalysisIt = apvMap_.find(detId);
  if(apvAnalysisIt != apvMap_.end())
    {
      for(vector<ApvAnalysis*>::const_iterator apvIt = (apvAnalysisIt->second).begin(); apvIt != (apvAnalysisIt->second).end(); apvIt++)  
  { 
    if(!( (*apvIt)->pedestalCalculator().status()->isUpdating() ))
      updating = false;
  }
    }
  return updating;

}

void ApvAnalysisFactory::deleteApv(ApvAnalysis* apv){
  delete &(apv->pedestalCalculator());
  delete &(apv->noiseCalculator());
  delete &(apv->mask());
  delete &(apv->commonModeCalculator().commonMode()->topology());
  delete (apv->commonModeCalculator().commonMode());
  delete &(apv->commonModeCalculator());
  delete apv;

}
//
// -- Get Common Mode Slope
//
float ApvAnalysisFactory::getCommonModeSlope(uint32_t detId, int apvNumber){
  map<uint32_t, vector<ApvAnalysis* > >::const_iterator theApvs_map =  apvMap_.find(detId);
  float tmp = -100.0;
  if(theApvs_map != apvMap_.end()) { 
    vector<ApvAnalysis* > theApvs = theApvs_map->second;
    tmp = theApvs[apvNumber]->commonModeCalculator().getCMSlope();
    return tmp;
  }
  return tmp;
}
void ApvAnalysisFactory::getCommonModeSlope(uint32_t detId,ApvAnalysis::PedestalType& tmp)
{
  tmp.clear();
  map<uint32_t, vector<ApvAnalysis*> >::const_iterator apvAnalysisIt = apvMap_.find(detId);
  if(apvAnalysisIt != apvMap_.end()) {
    vector<ApvAnalysis* > theApvs = apvAnalysisIt->second;
    for( unsigned int i=0; i< theApvs.size(); i++) {
      tmp.push_back(theApvs[i]->commonModeCalculator().getCMSlope());
    }
  }
}